Nuovo applicativo e batch
Gli amministratori del progetto Gerasim hanno aggiornato l'applicativo del progetto (solo per cpu) e hanno lanciato un nuovo batch da 200k wus.
BOINC.Italy
La community italiana dedicata al calcolo distribuito
Gli amministratori del progetto Gerasim hanno aggiornato l'applicativo del progetto (solo per cpu) e hanno lanciato un nuovo batch da 200k wus.
Veronese, classe immensa, è colui che ci ha permesso di traghettare il portale dalle secche di un antiquato Joomla alla più recente novità in fatto di web. Sempre allegro e pronto alla battuta, è così bravo nel suo lavoro che è in grado di scrivere con una mano codice PHP e, nello stesso tempo, tenere nell'altra mano un bicchiere di buon Chianti.
E' spesso presente dietro le quinte del sito dove amministra con certosina pazienza tutti i dettagli necessari al corretto funzionamento del portale.
Lo potete trovare anche qui

Nata a Napoli nel 1987, ha conseguito la laurea triennale in "Culture digitali e della comunicazione" e quella magistrale in "Informazione, editoria e giornalismo". Da sempre appassionata all'universo web,
ha conosciuto il calcolo distribuito e Boinc per caso, ma è stato amore a prima vista! Ecco perché ha volentieri collaborato in parte alla realizzazione grafica di alcune sezioni del sito, come loghi e banner vari,
medagliette di avanzamento di grado, loghi per maglie stampate, ecc. Nonostante il lavoro da giornalista e quello da web content manager, quando può contribuisce graficamente all'espansione di quel piccolo grande (e soprattutto socialmente indispensabile) mondo che è Boinc.Italy.
Gentili amici,
come molti di voi sapranno il progetto GPUGRID, nato e vissuto per anni grazie alle schede Nvidia, ha lanciato un applicativo di test per le schede video AMD.
Per poter provare questo nuovo applicativo, è necessario (oltre a possedere una scheda video AMD) configurare il proprio account nella seguente maniera:
Usa la CPU: si
Avviare applicazioni di test: si
Molecular Dynamics on AMD GPUs: yes
Use graphic processing unit (GPU) if avaiable: yes
Use central process unit (CPU): yes
Il client comincerà a scaricare le app per la vostra GPU, anche se noterete alcune incongruenze
1) Il client chiede lavoro per cpu, ma vengono scaricate wu per gpu
E' causato dal fatto che lo scheduler del server del progetto non è recentissimo, quindi hanno dovuto usare questo "trucchetto" per poter rilasciare lavoro per Opencl
2) L'app utilizzerà, oltre alla gpu, anche tutti i core cpu che troverà a sua disposizione. Il manager mostrerà, nella schermata, solo l'uso delle cpu (e non come, per esempio in poem, una scritta tipo 1cpu+1gpu).
Non preoccupatevi, anche questo è dovuto al "trucchetto" di cui sopra. Basta avviare gpu-z per vedere il reale utilizzo della gpu.
Buona scaccolata!!
Aree di ricerca
Trasformazioni equivalenti e partizionamenti di schemi-grafi di algoritmi di controllo di logica parallela per il design di sistemi di controllo logici.
Obiettivo scientifico
Analisi della qualità delle partizioni schemi-grafi di algoritmi di controllo di logica parallela, ottenuti con diversi metodi euristici.
Descrizione del progetto
I sistemi di controllo logico (PLC) recentemente sono diventati più diffusi a causa del crescente utilizzo di linee di assemblaggio robotizzate automatiche in grado di effettuare le operazioni necessarie con poco o nessun intervento umano (o riducendo tale coinvolgimento al minimo), da un lato, e il successo della microelettronica (FPGA, GA, SOC, ecc), che segue la legge di Moore, dall'altro.

Classe '76 , diplomato Tecnico Industrie Elettriche ed Elettroniche scopre il Calcolo Distribuito quasi per caso
nel web cercando "compilazione distribuita su macchine GNU/Linux" (correva l'anno 2008-2009).
Si registra a Boinc@Italy nel 2010 ma comincia a frequentarne il forum solo nel 2012.
Progetti preferiti quelli medico-scientifici , in particolare GPUGrid.
Utilizzatore del Sistema Operativo GNU-Linux ,e' il manutentore improvvisato del server di BOINC.Italy.
Il team di Rosetta augura a tutti un buon anno e pubblica un breve riassunto degli ottimi risultati raggiunti dal team durante il recente CASP11. Ringraziano, inoltre, tutti i volontari per il contributo dato!
Gentili amici,
già lo scorso anno ho solleticato le vostre papille gustative con un veloce excursus riguardante le più disparate forme di alimentazione alternativa presenti in questo nostro disparato mondo. Durante le ricerche preparatorie per l’articolo mi ero imbattuto nell’altisonante nome di “Specie Umana: Progetto 3M”, ma lo avevo messo velocemente in una cartella per l’eventuale bibliografia (lo aveva già citato di sfuggita anche il buon Danieleg nel vecchio thread). Grave errore il mio!!!! Il “Progetto 3M” è veramente un luminoso esempio di come sia possibile costruire uno stile di vita basandosi sul nulla.
La forma
Il progetto consiste in un libro on-line, un pdf di 1773 pagine (che il sottoscritto, con gravi rischi per la sua salute mentale, si è sciroppato integralmente) impaginate da un tossicodipendente in crisi di astinenza (font delle più diverse fogge e fatture, testo non giustificato, paragrafi ed interlinee che cambiano ogni 3 righe, ecc, ecc) , tant’è che se fossero correttamente revisionate occuperebbero non più di 150 pagine.
Gli autori del libro, vista la sua vitale importanza per il genere umano, ovviamente sono anonimi e nessun riferimento è presente sul sito da cui è possibile scaricarlo gratuitamente, tranne l’indicazione tipica: fate girare il più possibile.
All’interno del pdf, poi, è fin da subito ben chiara la levatura scientifica del tutto, quando gli autori sottolineano che:
“Questo libro, ormai ampiamente diffuso in tutto il mondo da anni, è stato scritto col metodo intertestuale moderno, cioè con la formattazione derivata dall'interazione tra molte centinaia di scienziati specialisti nelle singole discipline scientifiche provenienti da tutto il pianeta (diverse decine di essi, a seconda dell'argomento, per ogni capitolo, paragrafo o singolo settore di quest'ultimo) che hanno unito i risultati delle ricerche scientifiche più avanzate in assoluto……tali ricerche scientifiche, dalla fisica particellare, alla fisica nucleare, meccanica quantistica, astrofisica, biofisica, biochimica, biologia molecolare, paleoantropologia moderna, anatomia comparata, fisiologia comparata, morfologia funzionale comparata fitozoologica(???), scienza dell'alimentazione moderna, medicina moderna, patologia moderna, terapeutica moderna, ecosistemica moderna, urbanistica comparata moderna, scienza economica e finanziaria applicata moderna, scienza politica applicata moderna, sociologia applicata moderna, scienza della conversione industriale, scienza moderna dei sistemi di produzione alimentare mondiale, scienza delle costruzioni moderna, scienza della eco-produzione energetica mondiale, ecc.”
Beh, ovvio che uno, dopo un incipit del genere, abbia delle aspettative abbastanza alte! Poi, però, l'odore di supercazzola da quattro soldi elevatissima scienza comincia a farsi abbastanza forte:
“I PIU' GRANDI SCIENZIATI AL MONDO in ogni campo hanno accettato di APRIRE LETTERALMENTE i propri armadietti professionali più preziosi, contenenti LE PIU' GRANDI SCOPERTE SCIENTIFICHE DI TUTTI I TEMPI in ogni settore TENUTE SEGRETE PER DECENNI, e talvolta tramandate addirittura per qualche secolo, senza che la popolazione purtroppo avesse la minima idea che esistessero”.
Ma caspita, ma io queste centinaia di scienziati voglio conoscerli, voglio stringer loro la mano per ringraziarli personalmente uno a uno….ed invece no:
“le MOLTE CENTINAIA di SCIENZIATI predetti che hanno unito i risultati sperimentali ultradecennali iniziali non ancora ufficializzati e poi incrociati con quelli dei colleghi delle altre discipline scientifiche, hanno ritenuto opportuno PREFERIRE L'ANONIMATO”.
Per fortuna, però, ci hanno lasciato il nome di questa nuova disciplina che dovrebbe rivoluzionare la vita umana, ovvero la “Oloscienza”,
"i cui parametri di base sono quelli postdetti, e la cui struttura di base è proprio esattamente quella del PRESENTE TESTO, che rispecchia la massimamente POTENTE PROCEDURA FONDAMENTALE per affrontare e RISOLVERE qualsiasi problema relativo alla specie umana, di portata anche MONDIALE."
Oh, mammina, questi possono risolvere QUALSIASI problema mondiale, avete capito? E come possiamo fare per aiutarli, ma ovviamente imparando tutti l’Oloscienza, ignoranti che non siamo altro:
“UNIVERSITA' OLOSCIENTIFICA, comprendente SOLO ed ESCLUSIVAMENTE la suddetta OLOSCIENZA, e che, come tutte le strutture PIU' PROGREDITE IN ASSOLUTO, deve avere una impostazione SEMPLICE ed EFFICACE”.
Il contenuto
Dopo aver compreso a fondo “il come” possano questi centinaia di scienziati (e anche noi iscritti alla facoltà di Oloscienza) migliorare le sorti del mondo, dobbiamo capire “il cosa”, ovvero il contenuto profondo di queste 1700 pagine. L’autore entra subito nel merito della questione enunciando un teorema fondamentale dell’Oloscienza:
“OGNI SINGOLO ATOMO DI TUTTO IL NOSTRO ORGANISMO PROVIENE SOLO ED ESCLUSIVAMENTE DAL CIBO”.
Quindi, di che cibo dovremmo essere fatti? “la SPECIE UMANA non è "onnivora", non è carnivora, non è granivora, non è erbivora, non è frugivora (da "fruges"= frutta e parti tenere di vegetali), ma è fruttivora ed in particolare è assolutamente MALIVORA [da "malum"(a sua volta da "malon"= il frutto)= mela].”
Ma scusate, sono arrivato a pagina 50 del Vostro testo e mi dite di mangiare una mela (e che siete dei semplici Melariani)? Ma me lo diceva anche mio nonno quando ero bambino. E le restanti 1723 pagine adesso come le riempite??
Andiamo, però, con ordine altrimenti non si capisce come si sia arrivati alla mela. Motivo per cui la prima domanda che ci facciamo è “Come è nata l’umanità”?
“La specie umana, cioè, non solo nacque perfettamente MALIVORA si nutriva, quindi, solo ed esclusivamente di mele (per l'esattezza di variazione cromatica rossa), ma addirittura nacque solo ed escusivamente grazie alla struttura anatomica stessa del melo, che da struttura arborea a basso fusto ha costretto la nostra struttura primatica arboricola a locomozione sospensoria ad adattarsi gradualmente alla locomozione bipede terrestre”.
Ah, praticamente l’uomo è diventato eretto per raccogliere le mele, interessante teoria che si completa con i dati seguenti:
“A quel punto, è ormai scientificamente chiarissimo che l'uomo continuò a vivere in quella sorta di paradiso terrestre per ben 5,2 milioni di anni, in cui i pochi reperti fossili indicano anche una assenza totale di malattie e una vita media come minimo molto superiore ai massimi standard attuali, addirittura sembra con limite vitale indefinito”.
Cioè, mangiando solo mele (solo rosse, tra l’altro) erano diventati immortali? Fantastico!! Corro subito dal mio fruttivendolo sotto casa!
Ma perché la mela e non, per esempio, l’arancia? Ovvio, perché
“La MORFOFUNZIONALITA' TROFICA SPECIE-SPECIFICA della SPECIE UMANA è anch'essa MOLTO CHIARA e indica precisissimamente anche la PROVENIENZA SPAZIALE NATURALE dell'UNICO cibo ANATOMO-FISIOLOGICAMENTE ADATTO alla sua specie”, ovvero, “nei MILIONI di anni di CO-EVOLUZIONE, acquisisce una STRUTTURA MORFOFUNZIONALE (e biochimico-fisiologica) PERFETTAMENTE COMPLEMENTARE proprio alla STRUTTURA MORFOFUNZIONALE (e biochimico-fisiologica) del FRUTTO stesso”.
In pratica, dal momento che la forma della mano sembra essere "fatta apposta" per contenere una mela, allora la mano si è “evoluta” per raccogliere le mele. Praticamente ci sarebbero da riscrivere tutti i libri di paleontologia finora stesi, dal momento che le mele sono state alla base sia dell’ergersi dell’uomo in posizione verticale sia del pollice oppositivo!!
E gli altri cibi? Quelli che fin dalla preistoria accompagnano il cammino dell’uomo? Ecco, dimenticateveli:
“Dunque, quando riferendosi alla specie umana, si parla di altra frutta, della cosiddetta "verdura", dei cosiddetti "semi", del latte aspecifico, dei cosiddetti "formaggi", delle uova, del cosiddetto "pesce", della cosiddetta "carne", ecc. non si sta ovviamente parlando di qualcosa che ha minimamente a che fare col concetto di "cibo", in quanto, ovviamente, sono solo ed esclusivamente componenti ecosistemiche trofo-aspecifiche, e quindi, come vedremo meglio nel capitolo relativo alla patologia moderna, se introdotti dentro il nostro organismo costituiscono semplicemente un insieme di tossine trofo-aspecifiche (cioè di componente ecosistemica trofo-aspecifica), innescando immediatamente il processo patologico”.
Secondo voi, centinaia di scienziati Progettisti 3M, basterebbe quindi una dieta vegana per poter vivere meglio? Giammai, dal momento che
“è esattamente per questo motivo che chi si "nutre" ancora anche di cadaveri animali, o ancora anche di cadaveri vegetali (come gli umani ancora "onnivori", vegetariani, vegan, vegan-crudisti, ecc.), ha una defecazione ancora estremamente o decisamente puzzolente, cosa che avviene in maniera quasi nulla nei fruttariani, e assolutamente del tutto nulla, anzi con un odore addirittura piacevole (come specialmente per le urine) nei melariani di tutto il mondo.
Ecco, io adesso, amici melariani, non vorrei spaventarvi, ma il cambio di odore dell’urina spesso (ma non sempre, si pensi agli asparagi) è legato ad un cambiamento del PH della stessa e questo, ve lo devo dire, non è una cosa bellissima dal punto di vista medico, eh.
E comunque io due mele cotte con lo zucchero me le farei proprio….giammai: "IN NATURA NON ESISTE ASSOLUTAMENTE IL CIBO COTTO, infatti, SIAMO L'UNICO ANIMALE CHE CUOCE I CIBI”.
Vero! Dobbiamo anche considerare, però, che siamo l'unico animale in grado di scrivere programmi in linguaggio Java.
Vogliamo poi parlare della mela di Adamo ed Eva o dell'Olimpico Pomo della Discordia? E Guglielmo Tell dove lo mettete? E "Il Tempo delle Mele"?? Ecco, io direi di fermarmi qui (anche perché riassumere 1700 pagine di cazzate, Oloscienza non è facile) dal momento che vi ho dimostrato chiaramente come è possibile cambiare in meglio l’umanità mangiando le mele.
Mangiate mele rosse crude e solo quelle, mi raccomando!!
Gentili amici scaccolatori,
credevo che questo momento non sarebbe mai arrivato ed invece eccoci qui. Abbiamo infatti deciso, di comune accordo con chi sta eseguendo la migrazione, di aprire la fase di test pubblico del nuovo sito. In questo post vi dirò come accedervi e vi chiedo, in cambio, di segnalare le eventuali problematiche che incontrerete nella fruizione dello stesso. Dovete, ovviamente, considerare alcune cose:
1) Il sito è "freezzato" ad alcuni mesi fa, quindi non stupitevi se i post nel forum, ad esempio, sono vecchi.
2) Se farete delle modifiche (tipo un nuovo post sul forum), queste andranno perse nella migrazione finale.
Per accedere al nuovo sito
Come prima cosa dovrete editare il vostro file hosts (per gli utenti windows esso è presente in C:\windows\system32\drivers\etc\, per gli utenti linux è in /etc/, mentre per gli utenti Mac non ne avrei idea....) con la seguente riga
95.141.32.165 www.boincitaly.org
Salvate il file e aprite il browser (provateli pure tutti)
L'indirizzo del nuovo sito è
N.B. Ovviamente dopo la modifica del file hosts non riuscirete più ad accedere al sito in produzione. Per farlo dovrete ri-editare il file hosts (magari inserendo una # all'inizio della riga di cui sopra, così da disabilitarla).
Sul sito di test funzioneranno correttamente le vostre credenziali di login
Cosa fare
Provate un pò di tutto, magari quello che fate tutti i giorni. Girate le varie sezioni del sito, create post, thread, ecc.
Dopo di che, venite in questo thread e segnalate cosa avete trovato che non va. Io provvederò ad inserirlo nella lista sottostante e a cominciare a lavorarci sopra. Quando saranno risolte, verrà tirata una riga sopra.
Comincio io stesso a popolare la lista:
Buon lavoro a tutti.

Utente BOINC dal 4 novembre 2007 grazie a un servizio di TG Leonardo su SETI@home, entra in BOINC.Italy pochi mesi dopo per la gioia di tutti gli altri membri e dei Moderatori soprattutto. La grande passione per il calcolo distribuito lo porta in breve tempo a passare intere giornate sul forum, spammando in ogni dove.
Dopo aver rischiato 3 o 4 cento volte di ottenere il triste record di primo utente bannato dal Portale, ha messo la testa a posto e fa ora parte a pieno titolo dello staff. Scartati per ovvi motivi i ruoli di Amministratore e Moderatore e per mancanza di doti quelli di grafico, sistemista, organizzatore, traduttore, inventore ed alchimista, si ritrova nominato d'ufficio "Collaboratore generico". Ruolo che tutto sommato non gli dispiace e che gli consente di sindacare e intromettersi in qualunque discussione aperta sul forum.
Quando non è online su BOINC.Italy si sta probabilmente ubriacando nel peggiore bar di Caracas nel vano tentativo di tramortire il suo unico neurone, le cui eccezionali capacità sono chiaramente visibili nella sezione Domande Frequenti e in numerose altre iniziative all'interno del Portale.


Studente di biologia all'università di Pavia, classe 1986, segue soprattutto i progetti di tipo medico.
Collabora al portale curando la documentazione e le traduzioni legate ai progetti di tipo medico. Scrive articoli sulle novità di Rosetta@home ed altri progetti correlati (RALPH, fold.it).
E' presente nel forum di discussione dove partecipa alle iniziative della community.

Nato a Imola nel 1969, appassionato di informatica (primo PC un ZX Spectrum 48K) e Basket NBA, nel 2007 scopre il calcolo distribuito e un anno dopo si unisce al team e al forum, cominciando a spammare inutilmente, ma anche facendo il referente per il progetto MalariaControl.
Per BI, oltre a essere uno dei MOD del Forum, gestisce anche la pagina su Facebook, facendo sostanzialmente da eco alle iniziative del portale o linkando importanti notizie dai vari progetti o che riguardino la scienza e la tecnologia in generale. Ha conseguito a pieni voti un Master in Amministratore dei sistemi informatici RIS-PACS.

Bellunese, classe 1987, ho conosciuto il calcolo distribuito nel 2009, durante una mia ricerca su internet di materiale riguardante Einstein (mai più finita), e dal 2013 ho fatto l'autodidatta nella comprensione di questo argomento, avvicinandomi alla Community Boinc Italy ed alle sue iniziative, con un maggiore interesse rispetto a prima.

Padovano, classe '83, ha conseguito la laurea magistrale in Economia Internazionale (Economia d'Impresa) presso la facoltà di Scienze Politiche.
Ha conosciuto BOINC tramite Hardware Upgrade nel 2005, nel 2007 è entrato con entusiasmo a far parte di BOINC.Italy aiutando lo staff originario e diventando successivamente amministratore.
Dopo un periodo di lavoro in estremo oriente ora vive felicemente nelle Perfida Albione e da lì, con sguardo benevolo, controlla tutti i nostri movimenti.

Friulano, classe '69, laureato in ingegneria industriale, programmatore. La passione per i PC e l'elettronica lo porta ad occuparsi di automazione industriale, cosa di cui attualmente campa, gironzolando per l'Italia e per il mondo.
Ha conosciuto BOINC passando per Folding@home ed ora ha una vera e propria farm con tanto di server multiprocessore e impianto fotovoltaico da 6kW. Ha contribuito alla crescita della community attraverso le sue numerose attività portate avanti in questi anni, tra cui la documentazione e gli articoli relativi ai progetti di ricerca, la stesura di guide e pagine di approfondimento, ed alle iniziative realizzate quali la newsletter, le immagini con le statistiche personalizzate, la sfida CASP.ITA, e molte altre.
Le ultime voci di corridoio lo davano sperso per alcune lande oltralpe.......attendiamo sue notizie!!

Veronese, classe 1975, informatico e appassionato di calcolo distribuito (nonostante la laurea in filosofia), contribuisce alla community con la traduzione e la ricerca di documentazione sui progetti. E' presente nel forum di discussione dove comunica le novità dei vari progetti, in particolare di quelli biomedici, e gestisce il Glossario del portale e la sezione della Pubblicazioni Scientifiche.
Risulta essere, inoltre, l'epistemologo ufficiale del gruppo, sempre attivo alla ricerca e confutazione di pseudoscienze e appassionato di debunking.

Nato il 22 maggio del 1986 a Mirandola, nel modenese, attualmente vive vicino a Carpi, sempre nella provincia di Modena. E' laureato in Ingegneria delle Telecomunicazioni presso l’Università di Modena. Ha conosciuto BOINC tramite Hardware Upgrade nel 2003, e nel 2007 ha seguito il team nel cambio di nome in BOINC.Italy. Si è inserito progressivamente nello staff, aiutandolo tra l’altro nella creazione di alcune funzioni delle statistiche interne, fino ad assumere l’attuale carica di amministratore.
Nonostante un carattere non particolarmente piacevole, è riuscito a farsi benvolere da tutta la comunità, che lo tratta un po' come una pezza da piedi che deve sistemare tutte le rogne.

Nato a Pisa nel 1984, appassionato di tecnologia ed informatica, nel 2002 scopre il calcolo distribuito nel forum di Hardware Upgrade, ai tempi del Seti Classico. Dal 2003 guida il team, portandolo, grazie alla sua passione ed alle sue idee, da piccolo team nel forum di Hardware Upgrade a grande community con portale dedicato.
Gestisce i vari aspetti della community, soprattutto dal lato tecnico ed organizzativo.
Attualmente impegnato come sviluppatore e system administrator nel reparto IT di un istituto di credito toscano, ha realizzato il portale BOINC.Italy e le sue svariate funzioni per gli utenti BOINC che gestisce con l'aiuto dei vari collaboratori.
Sempre attivo nella realizzazione delle sue idee ed iniziative della community, è alla costante ricerca di soluzioni per far crescere BONC.Italy e diffondere il calcolo distribuito in italia. (ecco, magari questa frase prendetela con beneficio di inventario)
DNA@HOME, dettagli scientifici del progetto

IMMAGINE 1
Il termine "epigenetica" significa "sopra il gene”, e si riferisce a cambiamenti nell'espressione genica che sono indipendenti dalla sequenza del DNA. Ciò significa che il nostro modo di interagire con il nostro ambiente, il cibo che mangiamo, le sostanze chimiche a cui siamo esposti, ecc possono tutti avere la capacità di cambiare quali geni sono “accesi” e che sono “spenti”, senza mutare il DNA. Questi cambiamenti, indicati collettivamente come "epigenomica", possono influenzare non solo i nostri geni, ma possono essere stabilmente ereditati e influenzare i nostri figli di geni e anche dei nostri nipoti!
La regolazione epigenetica dell'espressione genica si realizza attraverso le azioni di metilazione del DNA, del codice istoni, e con RNA non-codificanti (ad esempio, miRNA), che possono funzionare indipendentemente o in concerto. Il contributo preciso di ogni fattore può variare a seconda del particolare gene di interesse e del suo contesto, per esempio, specie, tipo di cellula, stadio di sviluppo, e l'età dell'organismo. Anche se non tutte le modifiche epigenomiche dovrebbero essere problematiche, alcune potrebbero avere conseguenze negative (ad esempio, uno sviluppo anormale, un aumento della suscettibilità alle malattie).
Con il progetto DNA@Home, studiamo il modo in cui le proteine note come “fattori di trascrizione” si legano per individuare e selezionare le regioni del nostro genoma. Il nostro focus è su due fattori molto interessanti chiamati “Snail” e “Slug” (non legate agli animali del giardino), che hanno dimostrato di giocare un ruolo critico nella malattia. Le espressioni di “Snail” e “Slug” provocano la perdita di proteine di adesione cellulare, rendendo le cellule meno "appiccicose" e più "mobili", causando le metastasi. Così, come si può immaginare, la comprensione di come queste proteine sappiano a quali specifiche sequenze di DNA legarsi, è cruciale nello sviluppo di bersagli terapeutici per le malattie come il cancro.
La famiglia di proteine “Snail” ha dimostrato di svolgere un ruolo importante sia nello sviluppo fisico che nella malattia. Le due proteine “Snail” e “Slug” sono molto simili, come si è visto in questa immagine (2).

IMMAGINE 2
Proteine “Snail” e “Slug” (NDT: “Lumaca” e “Chiocciola”)
La regione repressiva nella prima metà delle proteine è simili all’89%, mentre le regioni di estremità (regioni che legano il DNA) sono 84% identiche. Vi sono anche alcune differenze, soprattutto nel mezzo delle proteine.

IMMAGINE 3
Slug ed EMT (Transizione Epitelio-Mesenchimale):
Questa immagine (3) mostra quello che accade alla proteina E-caderina (tinta in rosso) prima e dopo l'espressione “Snail”. Le cellule sono generalmente in uno stato "epiteliale", il che significa che le cellule sono attaccate insieme. Si può vedere un modello ben definito di E-caderina, che mostra un modello “acciottolato” (cobblestone) o “a maglie” (rosse). Dopo induzione Snail, l’espressione E-caderina si perde, così le cellule perdono la loro "viscosità", e iniziano a muoversi. Il nucleo di ogni cellula è macchiato in blu.
Grazie alla potenza di calcolo messa a disposizione cercheremo di capire il funzionamento di queste due proteine e di come porre rimedio ad eventuali malfunzionamenti.
Gli amministratori hanno rilasciato, dopo molti mesi di sviluppo e debug, una nuova versione stabile del client Boinc, la 7.4.27.
Qui le note di rilascio, con novità che vanno dal supporto OpenCL 1.2 per le cpu alla possibilità delle notifiche con immagini e video.
La nuova versione che sta per arrivare (la 7.4) non supporterà più versioni di CUDA precedenti alla 6.5, quindi tutte le schede video non in grado di supportare questa versione non saranno più utilizzabili con Boinc. La CC (Computer Capability) richiesta, quindi, sarà almeno la 1.3. Qui la lista delle GPU con le relative caratteristiche gpgpu.
Gli amministratori del progetto CSG hanno rilasciato un nuovo batch per il progetto DNA@Home, e le wu inizieranno con il nome "test_hg19_10fa_1". Questo batch dovrebbe essere più corto dei precedenti, ma vogliono testare se funzionano i checkpoint personalizzati che hanno inserito nel codice (cos' che non ci siano checkpoint ogni secondo). Se funzionerà, partiranno batch molto più corposi.

Il canale IRC di Boinc Italy
Per collegarsi al canale IRC di Boinc Italy accedi da qui .
I ricercatori dell'Accademia Russa per le Scienze hanno rilasciato CluBORun (Cluster for Boinc Run), un tools per far girare Boinc su un cluster. Un articolo che descrive il funzionamento è disponibile qui
Un recente articolo nella rivista Future Generation Computer Systems, descrive come Boinc può essere usato come applicativo cloud o come estensione del Servizio Grid Europeo basato su gLite.
Ieri sera il team di Citizen Science Grid ha rilasciato una nuova versione dell'applicativo per DNA@Home, con un batch già attivo. Questa versione comincerà finalmente l'analisi del genoma umano e gli scienziati sono molto curiosi di vedere quali saranno i risultati.
Aiuta i nostri giovani ambiosi scienziati a pensare fuori dal coro con una grande ricerca!!
iGEM@Home è un software, progettato dal Igem Team di Heidelberg per dividere task di computazione intensivi in piccoli pacchetti e distribuirli a vari computers. I volontari che offrono la potenza dei loro computer ai partecipanti della competizione iGEM, riceveranno questi pacchetti da calcolare mentre il loro computer è in stato di riposo.
Come alcuni di voi sapranno, i progetti DNA@Home, SubsetSum@home e WildLife@home sono stati riuniti sotto l'unico progetto multidisciplinare "Citizen Science Grid". Abbiamo provveduto a riunire i rispettivi thread di discussione all'interno di un nuovo thread nella sezione "Progetti Multidisciplinari". Per ora i thread sono semplicemente giustapposti, ma pensiamo in futuro di creare un unico thread sul modello WCG.
ATLAS@Home è un progetto di ricerca che usa il calcolo distribuito per eseguire simulazioni dell'esperimento ATLAS al CERN.
ATLAS è un esperimento di fisica delle particelle in esecuzione al Large Hadron Collider del CERN, che ricerca nuove particelle, mediante la collisione frontale di protoni caricati a livelli di energia elevatissimi. Petabytes di dati (milioni di milardi di bytes) sono stati registrati, processati ed analizzati durante i primi 3 anni di raccolda dati, consentendoci di pubblicare più di 300 articoli riguardanti tutti gli aspetti del Modello Standard della fisica delle particelle, compresa la scoperta del Bosone di Higgs nel 2012
David Baker, il responsabile del progetto Rosetta, ha pubblicato una lettera in cui ringrazia i partecipanti del progetto e aggiorna sullo stato del progetto, compresi i fondi che varie agenzie governative hanno assegnato al team di ricerca.
Qui maggiori dettagli.
Il Progetto TN Grid ci informa che al momento non ci sono workunits, ma che il lavoro fatto finora con le wu terminate e opportunamente visionate ha portato ad alcune conclusioni, visibili a breve sulla sezione "Pubblicazioni". Invitiamo tutti coloro che hanno contribuito a dare un'occhiata al lavoro di Mr Valterc e degli studenti che, tramite il suo corso, hanno avuto l'opportunità e la fortuna di creare un progetto, di mandare e ricevere elaborazioni, e di fare pure una pubblicazione (oltre alla partecipazione a convegni ed eventi sul tema).
Qui potete leggere la news, dal loro sito http://gene.disi.unitn.it/test/
I server Boinc (forum, download dell'applicativo, ecc) saranno spenti il 17 cm per la manutenzione dell'impianto.
Gli amministratori del progetto sono lieti di annunciare il client Ralph per dispositivi android-9 sia tablet che smarthphone. Sarà sufficiente installare il client boinc e aggangiare il progetto.
Gli admin del progetto annunciano che stanno per lasciar finire le attuali galassie - inoltre la prossima settimana eseguiranno un aggiornamento del software BOINC.
Quindi, una volta che la coda sarà vuota non saranno disponibili altre WU per una settimana.
Queste informazioni sono liberamente tratte da http://it.wikipedia.org/wiki/Margherita_Hack
Firenze, 12 giugno 1922 – Trieste, 29 giugno 2013
Astrofisica e divulgatrice scientifica.
Margherita Hack, dopo aver compiuto gli studi (senza sostenere gli esami di maturità a causa dello scoppio della seconda guerra mondiale) presso il Liceo Classico "Galileo" di Firenze, si laureò in fisica nel 1945 con una tesi di astrofisica sulle Cefeidi,
In gioventù la Hack, oltre alla pallacanestro, praticò con successo l'atletica leggera. Fu campionessa di salto in alto e in lungo in campionati universitari.
Attività scientifica
È stata professore ordinario di astronomia all'Università di Trieste dal 1964 al 1º novembre 1992. È stata la prima donna italiana a dirigere l'Osservatorio Astronomico di Trieste dal 1964 al 1987, portandolo a rinomanza internazionale.
Membro delle più prestigiose società fisiche e astronomiche, Margherita Hack è stata anche direttrice del Dipartimento di Astronomia dell'Università di Trieste dal 1985 al 1991 e dal 1994 al 1997.
È stata un membro dell'Accademia Nazionale dei Lincei.
Ha lavorato presso numerosi osservatori americani ed europei ed è stata per lungo tempo membro dei gruppi di lavoro dell'ESA e della NASA.
In Italia, con un'intensa opera di promozione ha ottenuto che la comunità astronomica italiana espandesse la sua attività nell'utilizzo di vari satelliti giungendo ad un livello di rinomanza internazionale.
Ha pubblicato numerosi lavori originali su riviste internazionali e numerosi libri sia divulgativi sia a livello universitario. Nel 1994 ha ricevuto la Targa Giuseppe Piazzi per la ricerca scientifica. Nel 1995 ha ricevuto il Premio Internazionale Cortina Ulisse per la divulgazione scientifica.
Margherita Hack nel 1978 fondò la rivista bimensile L'Astronomia il cui primo numero vide la luce nel novembre del 1979; successivamente, insieme con Corrado Lamberti, diresse la rivista di divulgazione scientifica e di cultura astronomica Le Stelle.
Attività sociale e politica
Margherita Hack era molto nota anche per le sue attività non strettamente scientifiche e in campo sociale e politico.
Era atea, non credeva in nessuna religione o forma di soprannaturalismo, avversa a ogni forma di superstizione, comprese le pseudoscienze, dal 2002, presidente onoraria dell'Unione degli Atei e degli Agnostici Razionalisti e dal 2005 si iscrisse all'Associazione Luca Coscioni per la libertà di ricerca scientifica. È stata iscritta al Partito Radicale Transnazionale.
In più occasioni si è candidata a elezioni (politiche e regionali), ma, pur eletta, preferì cedere il seggio per continuare i suoi studi.
Numerose e significative le sue prese di posizione sui vari temi
- sul nucleare: contro la costruzione di centrali nucleari in Italia, ma a favore della ricerca sul nucleare
- sui diritti civili: a favore dei diritti civili e del riconoscimento giuridico delle coppie omosessuali, per i quali nel 2010 è stata premiata come "Personaggio gay dell'anno"
- sull'eutanasia: come un diritto, un modo per sollevare dalla pena un uomo che soffre.
- sui diritti degli animali: è stata una animalista convinta ed una vegetariana sin da bambina.
Onorificenze e riconoscimenti
Sono state tante le onorificenze e i riconoscimenti, tra i tanti vogliamo ricordare:
— 4 febbraio 2011 l'asteroide 1995 PC, scoperto da Andrea Boattini e Luciano Tesi, è stato denominato "8558 Hack" dall'Unione Astronomica Internazionale.
Gli amministratori hanno reso disponibile la nuova versione dell'applicativo (la 3.52), che contiene un paio di bugfix relativi alla modellazione simmetrica. In caso di problemi siete pregati di postarli sul forum del progetto.
Gli admin del progetto comunicano che Dan Werthimer è andato alla Camera dei Rappresentanti degli Stati Uniti per presentare lo stato attuale della ricerca SETI. Ecco il testo integrale della sua testimonianza. Il video è disponibile a questo link.
Il decimo workshop internazionale su Boinc si terrà dal 29/09 al 02/10 di quest'anno presso la sede del SZTAKI Institute a Budapest. Sarà ampliata la parte dedicata all'hackfest con una giornata aggiuntiva, così da lasciare più spazio alla parte pratica riguardante il codice e i nuovi progetti.
E' stata pubblicata la nuova sezione del nostro sito, dedicata alle pubblicazioni scientifiche riguardanti Boinc e il mondo del calcolo distribuito volontario.
Scienze Cognitive
(Cognitive science)

--2016--
Godwin H.J., Walenchok S. et al. - "Faster than the speed of rejection: Object identification processes during visual search for multiple targets". J of Exp Psyc Human Percept Perfom 41(4), 2016. Link
--2014--
Moore L. R., Gunzelmann G. - "An interpolation approach for fitting computationally intensive models". Cognitive Systems Research 19, 2014. Link
--2011--
Moore L.R. - "Cognitive model exploration and optimization: a new challenge for computational science". Computational and Mathematical Organization Theory 17(3), 2011. Link
--2010--
Moore L.R., Kopala M., Mielke T. et al. - "Simultaneous performance exploration and optimized search with volunteer computing". 19th ACM International Symposium on High Perfomance Distribuited Computing, 2010. Link
--2009--
Harris J., Gluck K.A., Moore L.R. - "MindModeling@Home. . . and Anywhere Else You Have Idle Processors". 9th International Conference on Cognitive Modelling, 2009. Link
--2008--
Harris J. - "MindModeling@Home: a large-scale computational cognitive modeling infrastructure". CSER 2008. Link
--2007--
Gluck K., Scheutz M. - "Combinatorics meets processing power: Large-scale computational resources for BRIMS". 16th Conf Behaviour Rappresentation, 2007. Link
Progetti Non Boinc - Citizen Science
(Not-Boinc)
BlackHoles ° CosmoQuest ° Dizeez ° Dimes ° EteRNA ° EyeWired ° Folding ° Fold.It ° Gimps ° HashClash ° Hydrology ° LifeMapper ° Mark2Cure ° Models ° Muon1 ° Phylo ° Rad ° SetiLive ° SeventeenOrBurst ° Stall Catchers (Eyes on ALZ) ° Stardust ° The Cure ° The Dreamlab ° ZooUniverse
Jadoo N., Zachariah E. et al. - "superB/NRPy: Scalable, Task-Based Numerical Relativity for 3G Gravitational Wave Science". Class. Quantum Grav. 42, 2025. Link
Zachariah E. - "Boosting Algorithmic Efficiency: Numerical Relativity in Dynamical, Curvilinear Coordinates". NSF Award Number 2508377, 2024. Link
Jadoo N. - "SuperB: Enabling high mass ratio binary black hole inspirals with BlackHoles@Home". APS Meeting, 2024. Link
Zachariah E. - "BlackHoles@Home: First Gravitational Waveform Catalog". APS Meeting 68(6), 2023. Link
Zachariah E. - "BlackHoles@Home: Numerical Relativity on Consumer-Grade Computers, for the Benefit of Gravitational Wave Astronomy1". APS Meeting 66(5), 2021. Link
Zachariah E. - "The BlackHoles@Home Project: Black Hole Binaries on the Desktop Computer". APS Meeting 2019. Link

Moon Mapper
--2024--
Gay P. - "CosmoQuest's Citizen Science Builder: Open Source, Open Science, Tested Results, Used for Lunar Science". AGU Fall Meeting, 2024. Link
--2022--
Richardson M., Plazas Malagon A.A. et al. - "The CosmoQuest Moon Mappers Community Science Project: The Effect of Incidence Angle on the Lunar Surface Crater Distribution". Open J. Astrophys 5(13404), 2022. Link
--2020--
Wang Y., Xie M. et al. - "The minimum confidence limit for diameters in crater counts". Icarus 341, 2020. Link
--2019--
Bennet C.A., Gay P. et al. - "OSIRIS-REx and CosmoQuest: Using Citizen Science for Active Mission Operationsand Beyond". EPSC Abstracts Meeting 13, 2019. Link
--2018--
Myers J.L., Gay P. et al. - "Putting the focus on science: Astrometry and Photometry with Transient Tracker". American Geophys Union Meeting, 2018. Link
Bennet C.A., Gay P. et al. - "Hazard Identification Using CosmoQuest Citizen Science for the OSIRIS-REx Mission". Americ Geophys Union Meeting, 2018. Link
Grier J.A., Richardson M. et al. - "Crater Identification and Incidence Angle: A Preliminary Look Through the Eyes of CosmoQuest’s Citizen Scientists". 49th Conf of Lunar and Planetary Science, 2018. Link
Buxner S., Andrea J. et al. - "International Observe the Moon Night: Eight Years of Engaging Scientists, Educators, and Citizen Enthusiasts in NASA Science". AAS Meeting 231, 2018. Link
--2017--
Grier J.A., Richardson M. et al. - "CosmoQuest - Mapping Surface Features Across the Inner Solar System". Americ Astronom Society DPS Meeting 49, 2017. Link
--2014--
Robbins S.J. - "New crater calibrations for the lunar crater-age chronology". Earth and Planetary Science Letters 403, 2014. Link
Robbins S.J, Antonenko I., Kirchoff M.R. et al. - "The variability of crater identification among expert and community crater analysts". Icarus 234(109), 2014. Link
--2013--
Antonenko I., Robbins S.J., Gay P. et al. - "Effects of Incidence Angle on Crater Detection and the Lunar Isochron System: Preliminary Results from the CosmoQuest MoonMappers Citizen Science Project”. 44th Lunar and Planetary Science Conference, 2013. Link
--2012--
Robbins S.J, Antonenko I., Lehan C., Moore J. - "CosmoQuest Moon Mappers: Cataloguing the Moon”. National Lunar Sciences Forum, 2012. Link
Gay P., Antonenko I., Robbins S. J. et al. - "CosmoQuest MoonMappers: Citizen Lunar Exploration." European Planetary Science Congress 2012. Link
Education
2021 - 2020 - 2019 - 2018 - 2017 - 2016 - 2014 - 2013 - 2012
--2021--
Gugliucci N., Bracey G. et al. - "Motivations and Patterns of Engagement of CosmoQuest Participants".Communicating Astronomy with the Public Journal, 2021. Link
Gay P., Falco L. - "Mob Programming Astronomy". Americ Astro Society Bulletin 53(1), 2021. Link
--2020--
Gay P.L. - "Open Sourcing Citizen Science". Americ Astronom Soc Meeting #235, 2020. Link
--2019--
Durrell P.R., Gay P. et al. - "CosmoQuest: Streaming Science". AAS Meeting 233, 2019. Link
--2018--
Burge-Beckely T., Gay P. et al. - "Analyzing Integrity of Citizen Science Data". American Geophys Union Meeting, 2018. Link
Bakerman M., Gay P. et al. - "CosmoQuest: Getting Twitchy for Science". ASP Confer Series 524, 2018. Link
Nona Bakerman M., Buxner S. et al. - "Assessing Motivations and Use of Online Citizen Science Astronomy Projects". AAS Meeting 231, 2018. Link
Gay P., Buxner S. et al. - "CosmoQuest: Making the public your students and collaborators". AAS Meeting 231, 2018. Link
Buxner S., Maya B. et al. - "CosmoQuest: Measuring Audience Needs to Obtain Better Science". AAS Meeting 231, 2018. Link
Myers J.L., Lehan C. et al. - "CosmoQuest Transient Tracker: Opensource Photometry & Astrometry software". AAS Meeting 231, 2018. Link
Richardson M., Grier J. et al. - "CosmoQuest: A Glance at Citizen Science Building". AAS Meeting 231, 2018. Link
--2017--
Buxner S., Gay P. et al. - "Leveraging CosmoQuest: Quantitative Analysis of Audience Interests and Behaviors". Americ Geophys Union Meeting, 2017. Link
--2016--
Cobb W., Bracey G. et al. - "CosmoQuest Collaborative: Galvanizing a Dynamic Professional Learning Network". Americ Astro Society DPS meeting 48, 2016. Link
--2014--
Gugliucci N., Gay P., Bracey G., CosmoQuest Team - "Evaluating Motivations of Citizen Science and Impacts of Guerilla Outreach". Meeting of the Astronomical Society of the Pacific, 2014. Link
Gugliucci N., Bracey G., Costello K. et al. - "Designing Lessons for NGSS Using Citizen Science". Meeting of the Astronomical Society of the Pacific, 2014. Link
Bracey, G. "Evaluation of a Virtual Citizen Science Facility: A Comprehensive Mixed-Methods Approach". Astronomical Society of the Pacific Conference Series, 2014. Link
Gugliucci N. , Gay, P. , Bracey, G. , Antonenko, I. et al. - "Citizen Science with CosmoQuest: Science and Strategies". Astronomical Society of the Pacific Conference Series, 2014. Link
Gugliucci N. , Gay, P. , Bracey, G. - "Citizen Science Motivations as Discovered with CosmoQuest". Astronomical Society of the Pacific Conference Series, 2014. Link
Gay P., Lehan C. , Moore, J. et al. - "CosmoQuest: A Cyber-Infrastructure for Crowdsourcing Planetary Surface Mapping and More". 45th Lunar and Planetary Science Conference, 2014. Link
Gugliucci N., Gay P., Antonenko I. et al. - "CosmoQuest Collaboration. CosmoQuest Year 2: Citizen Science Progress, Motivations, and Education". Poster at the American Astronomical Society, AAS Meeting #223, 2014 (ADS abstract). Link
Gay P., Bracey G., Gugliucci N. - "TerraLuna: A CosmoQuest Adventure in Geology". 40th COSPAR Scientific Assembly, 2014. Link
Gay P. - "Designing a Virtual Research Facility to motivate Professional-Citizen Collaboration". 40th COSPAR Scientific Assembly, 2014. Link
Gay, P. - "Taking Science On-air with Google+". Communicating Astronomy with the Public Journal 14, 2014. Link
--2013--
Gay, P. - "Collaborative Cyberinfrastructure: Crowdsourcing of Knowledge and Discoveries." Invited Talk at American Geophysical Union, 2013. Link
Gibbs M.G., Buxner S., Gay P., Crown D.A. et al. - "Collaboration in teacher workshops and citizen science." American Geophysical Union, 2013. Link
Gugliucci N., Gay P., Bracey G., CosmoQuest Team - "CosmoQuest Year 1.5: Citizen Scientist Behaviors and Site Usage Across Multiple Projects." Poster at the American Astronomical Society, AAS Meeting #222, 2013. Link
Gay P., Gugliucci N., Bracey G. et al. - "The CosmoQuest Virtual Research Facility for the Public." 44th Lunar and Planetary Science Conference, 2013. Link
Gugliucci N., Gay P., Bracey G., et al. - "Study of Citizen Scientist Motivations and Effectiveness of Social Media Campaigns". Poster at the American Astronomical Society, AAS Meeting #221, 2013. Link
--2012--
Gay P., Lehan C., Bracey G., Gugliucci N. - "CosmoQuest: A Virtual Facility for Learning and Doing Science". European Planetary Science Congress 2012. Link
Lewis S., Gugliucci N., Amateur Astronomer Team et al. - "CosmoQuest: Virtual Star Parties as a Conduit to Citizen Science Research". American Astronomical Society Meeting #221, 2013. Link
Gugliucci N., Gay P., Bracey G. et al.- "Citizen Science and Planetary Science Education through CosmoQuest." American Geophysical Union, 2012. Link
Vesta
Wise J., Schmidt B.E., Cobb W.H. et al. - "The Dawn Mission’s Use of Google + Hangout for Professional Development and Product Assessment." 44th Lunar and Planetary Science Conference, 2013. Link
Scully J.E.C., Schmidt B.E., Gay P. et al. - "The Dawn Mission and Asteroid Mappers: Vesta Edition: The Impact of Crowd-Sourced Crater Counting". 44th Lunar and Planetary Science Conference, 2013. Link
Loquercio S., Good B.M., Al S. - "Dizeez: an online game for human gene-disease annotation". PloS One 8(8), 2013. Link

2015-2013 - 2012 - 2011 - 2009 - 2008 - 2007 - 2005 - 2004
--2015--
Kirkpatrick S. - "Jellyfish and other interesting creatures of the internet". Workshop on Struc and Funct of Complex Network, 2015. Link
--2013--
Argon O., Shavitt Y., Weinsberg U. - "Inferring the Periodicity in Large-Scale Internet Measurements". IEEE Infocom Proceeding, 2013. Link
--2012--
Shavitt Y., Zilberman N. - "Arabian Nights: Measuring the Arab Internet During the 2011 Events". IEEE Network 26(6), 2012. Link
Feldman D., Shavitt Y., Zilberman N. - "A structural approach for PoP geo-location". Computer Networks 56(3), 2012. Link
Marcus D., Shavitt Y. - "RAGE – A rapid graphlet enumerator for large networks". Computer Networks 56(2), 2012. Link
--2011--
Shavitt Y., Weinsberg U. - "Quantifying the Importance of Vantage Point Distribution in Internet Topology Mapping". IEEE Journal on Selected Areas in Communications 29(8), 2011. Link
--2009--
Gonen M., Shavitt Y. - "Approximating the Number of Network Motifs". Internet Mathematics 6(3), 2009. Link
Shavitt Y., Weinsberg U. - "Quantifying the Importance of Vantage Points Distribution in Internet Topology Measurements". IEEE INFOCOM, 2009. Link
Weinsberg U., Shavitt Y., Shir E. - "Near-Deterministic Inference of AS Relationships". INFOCOM Workshops, 2009. Link
Allalouf M., Kaplan E., Shavitt Y. - "On the Feasibility of a Large Scale Distributed Testbed for Measuring Quality of Path Characteristics in the Internet". 5th International Conf on Testbeds and Research Infrastr for the Development of Networks & Communities and Workshops, 2009. Link
--2008--
Almog A., Goldberger J., Shavitt Y. - "Unifying Unknown Nodes in the Internet Graph Using Semisupervised Spectral Clustering". International Conference on Data Mining Workshops, 2008. Link
Shavitt Y., Singer Y. - "Trading Potatoes in Distributed Multi-Tier Routing Systems". 3rd International Workshop on Economics of Networked Systems, 2008. Link
Feldman D., Shavitt Y. - "Automatic Large Scale Generation of Internet PoP Level Maps". Global Telecommunications Conference, 2008. Link
Shavitt Y., Tankel T. - "Hyperbolic Embedding of Internet Graph for Distance Estimation and Overlay Construction". IEEE Transactions on Networking, 16(1), 2008. Link
--2007--
Carmi S., Havlin S., Kirkpatrick S., Shavitt Y., Shir E. - "From the Cover: A Model of Internet Topology Using K-Shell Decomposition". National Academy of Sciences 104(27), 2007. Link
Shavitt Y., Singer Y. - "Beyond Centrality - Classifying Topological Significance Using Backup Efficiency and Alternative Paths". New Journal of Physics 9, 2007. Link
--2005--
Shavitt Y., Shir E. - "DIMES: Let the Internet Measure Itself". ACM SIGCOMM Computer Communication Review 35(5), 2005. Link
Buchanan M. - "DISTRIBUTED COMPUTING: Data-Bots Chart the Internet". Science 308(5723), 2005. Link
--2004--
Shavitt Y., Tankel T. - "On the Curvature of the Internet and Its Usage for Overlay Construction and Distance Estimation". 23th Conference IEEE Computer and Communications Societies, 2004. Link
Shavitt Y., Sun X., Wool A., Yener B. - "Computing the Unmeasured: An Algebraic Approach to Internet Mapping". IEEE Journal on Selected Areas in Communications 22(1), 2004. Link
Raz D., Shavitt Y., Zhang L. - "Distributed Council Election". IEEE Transactions on Networking 12(3), 2004. Link
Shavitt Y., Tankel T. - "Big-Bang Simulation for Embedding Network Distances in Euclidean Space". IEEE Transactions on Networking 12(6), 2004. Link

Choe C.A., Andreasson J.O. et al. - "Compact RNA sensors for increasingly complex functions of multiple inputs". Nat. Chem. 17, 1839–1852 (2025). Link
Tse V., Gutierrez M. et al. - "OpenASO: RNA Rescue—designing splice-modulating antisense oligonucleotides through community science". RNA J. 31(1091-1102), 2025. Link
Tangpradabkul T., Palo M. et al. - "Minimization of the E. coli ribosome, aided and optimized by community science". Nucleic Acids Research 52(3), 2024. Link
Andreasson J.O., Gotrik M.R. et al. - "Crowdsourced RNA design discovers diverse, reversible, efficient, self-contained molecular switches". Pnas 119(18), 2022. Link
Wayment-Steele H.K., Kladwang W. et al. - "Deep learning models for predicting RNA degradation via dual crowdsourcing". Nature Machine Intellig 4 (1174-1184), 2022. Link
Wayment-Steele H.K., Das R. - "Learning RNA structure prediction from crowd-designed RNAs". Nature Methods 19 (1181-1182), 2022. Link
Wayment-Steele H.K., Kladwang W. et al. - "RNA secondary structure packages evaluated and improved by high-throughput experiments". Nature Methods 19(1234), 2022. Link
Leppek K., Byeon G.W. et al. - "Combinatorial optimization of mRNA structure, stability, and translation for RNA-based therapeutics". Nature Communic 13(1536), 2022. Link
Wayment-Steele H.K., Kaladwang W. et al. - "RNA secondary structure packages ranked and improved by high-throughput experiments". Nat Methods 19(10), 2022. Link
Wayment-Steele H.K., Do Soon K. et al. - "Theoretical basis for stabilizing messenger RNA through secondary structure design". Nucleic Acids Research 49(19), 2021. Link
Yao H-T., Waldispuhl J. et al. - "Taming Disruptive Base Pairs to Reconcile Positive and Negative Structural Design of RNA". RECOMB 2021. Link
Bonnet E., Rzazewski P. et al. - "Designing RNA Secondary Structures Is Hard". J of Comput Biol 27(3), 2020. Link
Wellington-Oguri R., Fisker E. et al. - "Evidence of an Unusual Poly(A) RNA Signature Detected by High-throughput Chemical Mapping". Biochemistry 59(22), 2020. Link
Yesselman J.D., Eiler D. et al. - "Computational Design of Asymmetric Three-dimensional RNA Structures and Machines". Nature Nanotech 2019. Link
Koodli R., Keep B. et al. - "EternaBrain: Automated RNA design through move sets from an Internet-scale RNA videogame". Plos Comput Biol 15(6), 2019. Link
Portela F. - "An unexpectedly effective Monte Carlo technique for the RNA inverse folding problem". In press. Link
Wellington-Oguri R., Fisker E. et al. - "Evidence of an Unusual Poly(A) RNA Signature Detected by High-throughput Chemical Mapping". In press. Link
Shi J., Das R. et al. - "SentRNA: Improving computational RNA design by incorporating a prior of human design strategies". In press. Link
Wu M.J., Andreasson J.O.L. et al. - "Prospects for recurrent neural network models to learn RNA biophysics from high-throughput data". In press. Link
Yesselman J.D., Eiler D. et al. - "Computational Design of Asymmetric Three-dimensional RNA Structures and Machines". Nature Nanotech, 2019. Link
Portela F. - "Eterna: Towards a More Complete Crowdsourcing of Experimental Sciences". AAAS Annual Meeting 2016. Link
Anderson L., Fisker E., Treuille A. et al. - "Principles for Predicting RNA Secondary Structure Design Difficulty". J of Molec Biol 428(5), 2016. Link
Ochsenreiter R. - "Computational Refinement of SHAPE – RNA probing Experiments". Phd Thesis, 2015. Link
Kosaraju V.S. - "Towards Rational RNA Therapeutics: 3D RNA Engineering in a Massive Open Laboratory". California State Science Fair, 2015. Link
Treuille A., Das R. - "Scientific rigor through videogames". Cell Press 39(11), 2014. Link
Rowles T.A. - "Power to the people: does Eterna signal the arrival of a new wave of crowd-sourced projects?". BCM Biochem 14(26), 2013. Link
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Oesterle J., Ran Y. et al. - "Task-specific regional circuit adaptations in distinct mouse retinal ganglion cells". Science Advances 11 (17), 2025. Link
Pospisil D.A., Aragon M.J., EyeWirers et al. - "The fly connectome reveals a path to the effectome". Nature 634, 2024. Link
Bae J.A, Kim J.S., EyeWirers et al. - "Digital museum of retinal ganglion cells with dense anatomy and physiology". Cell 173(5), 2018. Link
Bae J.A, Kim J.S., EyeWirers et al. - "Structural and functional diversity of a dense sample of retinal ganglion cells". Biorxiv, 2017. Link
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About Eyewired
Jaskowiec M., Kowalska-Chranowka M. - "The Use of Games in Citizen Science Based on Findings from the EyeWire User Study". Games and Culture 0(0), 2023. Link
Venegas R.S. - "Digital play as an epistemic experience". Play, Philosophy and Performance Book, 2021. Link
Reeves N., West P. et al. - "A game without competition is hardly a game": The impact of competitions on player activity in a human computation game". HCOMP Meeting, 2018. Link
Tinati R., Luczak-Roesch M. et al. - "An investigation of player motivations in Eyewire, a gamified citizen science project". Comput in Human Behavior 73, 2017. Link
Iacovides I., Jennet C. et al. - "Do games attract or sustain engagement in citizen science?: a study of volunteer motivations". Human Factors in Comput Syst, 2013. Link

About Folding - 2025 - 2024 - 2023 - 2022 - 2021 - 2020 - 2019 - 2018 - 2017 - 2016 - 2015 - 2014 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008 - 2007 - 2006 - 2005 - 2004 - 2003 - 2002 - 2001 - 2000
About Folding
Israeli D., Noy A. et al. - "Localhost detour from public to private networks: Vulnerabilities and mitigations". Cryptogr. Commun. 17 (597–620), 2025. Link
Gapsys V., Kopec W. et al. - "Biomolecular simulations at the exascale: From drug design to organelles and Beyond". Current Opinion in Struct Biology 88, 2024. Link
Tuma I., Lansiaux E. - "Folding at home: Artificial intelligence and crypto symbiosis for the science". IET Blockchain 4(3), 2024. Link
Kratzke N. - "Volunteer Down: How COVID-19 Created the Largest Idling Supercomputer on Earth". Future Internet 12(6), 2020. Link
Curtis V. - "Patterns of Participation and Motivation in Folding@home: The Contribution of Hardware Enthusiasts and Overclockers". Citizen Science: Theory and Practice 3(1), 2018. Link
Folding
--2025--
Bhattacharjee A., Bowman G.R. - "Pathogenic BRCA1 Mutations Disrupt Allosteric Control by BARD1". J. Phys. Chem. B 129(31), 2025. Link
Raddi R.M., Marshall T. et al. - "Model Selection Using Replica Averaging with Bayesian Inference of Conformational Populations". J. Chem. Theory Comput. 21(12), 2025. Link
Goold S., Voelz V. et al. - "Expanded ensemble predictions of toluene--water partition coefficients in the SAMPL9 LogP challenge". Phys. Chem. J. 27(6005-6013), 2025. Link
Mallimadugula U.L., Cruz A.M. et al. - "Opening and closing of a cryptic pocket in VP35 toggles it between two different RNA-binding modes". eLife 14(104514), 2025. Link
--2024--
Qiu Y., Wiewiora R.P. et al. - "Non-Markovian Dynamic Models Identify Non-Canonical KRAS-VHL Encounter Complex Conformations for Novel PROTAC Design". JACS Au 4(10), 2024.Link
Tim M. - "Comprehensive Markov State Models for Assessing and Improving the Accuracy of Protein Folding Simulations". Phd Thesis, 2024. Link
Novak D. - "Molecular Simulation of Mutation Effects on Protein Folding and Function". Phd Thesis, 2024. Link
Bowman G.R. - "AlphaFold and Protein Folding: Not Dead Yet! The Frontier Is Conformational Ensembles". Annual Rev of Biomed Data Science 7, 2024. Link
Vithani N., Todd T.D. et al. - "G Protein Activation Occurs via a Largely Universal Mechanism". J. Phys. Chem. B 128(15), 2024.Link
--2023--
Bowman G.R., Pande V.S. et al. - "Folding@home: Achievements from over 20 years of citizen science herald the exascale era". Biophysical Journal 122(14), 2023. Link
Singh S. - "Parsing mechanisms of cancer drug resistance using distributed supercomputing". Bioph J 123(3), 2023. Link
Novak D., Voelz V. et al. - "Can massively parallel free energy calculations improve in silico affinity maturation of de novo designed miniproteins?". Biophys J 123(3), 2023. Link
Bowman G.R. - "What if all your favorite proteins are druggable". Cancer Resear 83(7_suppl), 2023. Link
Meller A., Ward M. et al. - "Predicting locations of cryptic pockets from single protein structures using the PocketMiner graph neural network". Nat Commun 14 (1177), 2023. Link
Meller A. "Drug specificity and affinity are encoded in the probability of cryptic pocket opening in myosin motor domains". Elife 12(e83602), 2023. Link
Stuchell-Brereton M.D., Miller J.J. et al. - "Apolipoprotein E4 has extensive conformational heterogeneity in lipid-free and lipid-bound forms". PNAS 120(7), 2023. Link
--2022--
Cruz M.A., Frederick T.E. et al. - "Discovery of a cryptic allosteric sitein Ebola s undruggable VP35 protein using simulations and experiments". Nat Commun 13 (2269), 2022. Link
Mehregan A., Perez-Conesa S. et al. - "Probing effects of the SARS-CoV-2 E protein on membrane curvature and intracellular calcium". Biochimica et BioPhys Acta (BBA) 1864(10), 2022. Link
Novack D., Qian L. et al. - "Oncogenic Mutations in the DNA-Binding Domain of FOXO1 that Disrupt Folding: Quantitative Insights from Experiments and Molecular Simulations". Biochemistry 61(1669-1682), 2022.
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Jansen J., Reimer K.C. et al. - "SARS-CoV-2 infects the human kidney and drives fibrosis in kidney organoids". Cell Stem Cell 29(2), 2022. Link
Islam M.S., Junod S.L. et al. - "Unprotected peptide macrocyclization and stapling via a fluorine-thiol displacement reaction". Nature Commun 13 (350), 2022. Link
Li Q., Jang B. et al. - "INK4 tumor suppressor proteins mediate resistance to CDK4/6 kinase inhibitors". Cancer Discovery 12 (1-16), 2022. Link
Tang C.P, Clark O. et al. - "GCN2 kinase activation by ATP-competitive kinase inhibitors". Nature Chem Biol 18 (207-215), 2022. Link
--2021--
Starr T.N., Czudonchowski N. et al. - "Antibodies to the SARS-CoV-2 receptor-binding domain that maximize breadth and resistance to viral escape". Nature 597, 2021. Link
Knoverek C.R., Mallimadugula U.L. et al. - "Opening of a cryptic pocket in ß-lactamase increases penicillinase activity". PNAS 118 (47), 2021. Link
Cubuk J., Alston J.J. et al. - "The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, and phase separates with RNA". Nature Communic 12 (1936), 2021. Link
Qiu Y., Smith D.G.A. et al. - "Development and Benchmarking of Open Force Field v1.0.0-the Parsley Small-Molecule Force Field". J. Chem Theor Comput 17(10), 2021. Link
Morris A, McCorkindale W et al. - "Discovery of SARS-CoV-2 main protease inhibitors using a synthesis-directed de novo design model". Chemic Communication 48, 2021. Link
Jansen J. Reimer K.C. et al. - "SARS-CoV-2 infects the human kidney and drives fibrosis in kidney organoids". Cell Clinic and Translat Report 29(2), 2021. Link
Bahr M.N., Nandkeolyar A. et al. - "Automated high throughput pKa and distribution coefficient measurements of pharmaceutical compounds for the SAMPL8 blind prediction challenge". J of Comput-Aided Molec Desing 35, 2021. Link
Wieder M., Chodera J.D. et al. - "Fitting quantum machine learning potentials to experimental free energy data: predicting tautomer ratios in solution". Chemic Science 34, 2021. Link
Suarez E., Wiewiora R.P. - "What Markov State Models Can and Cannot Do: Correlation versus Path-Based Observables in Protein-Folding Models". J. Chem Theor Comput 17(5), 2021. Link
Isik M., Rustenburg A.S. et al. - "Overview of the SAMPL6 pKa challenge: evaluating small molecule microscopic and macroscopic pKa predictions". J of Comput-Aided Molec Design 35(131-166), 2021. Link
Thomsom E.C., Rosen L.E. et al. - "Circulating SARS-CoV-2 spike N439K variants maintain fitness while evading antibody-mediated immunity". Cell 184(5), 2021. Link
Vithani N., Ward M.D. et al. - "SARS-CoV-2 Nsp16 activation mechanism and a cryptic pocket with pan-coronavirus antiviral potential". Biophys J 120(14), 2021. Link
Zimmerman M.I., Porter J.R. et al. - "SARS-CoV-2 Simulations Go Exascale to Capture Spike Opening and Reveal Cryptic Pockets Across the Proteome". Nature Chemistry 13, 2021. Link
Cubuk J., Alston J.J. et al. - "The SARS-CoV-2 nucleocapsid protein is dynamic, disordered, andphase separates with RNA". Nature Communications 12 (1936), 2021. Link
--2020--
Novack D., Qian L. et al. - "FOX01 Transcription Factor Folding Landscape Elucidates the Role of Disease Mutations". Biophys J. 118(3), 2020. Link
Solieva S., Voelz V.A. - "Using Molecular Simulation to Understand the Role of Conserved Residues in an Extremophilic Beta-Galactosidase". Biophys J. 118(3), 2020. Link
Albanese S.K, Chodera J.D. et al. - "Is Structure-Based Drug Design Ready for Selectivity Optimization?". J Chem Inf Model 60(12), 2020. Link
Mey A.J.S., Chodera J.D. et al. - "Best Practices for Alchemical Free Energy Calculations". Living Jour of Comput Molec Science 2(1), 2020. Link
Gkeka P., Stoltz G. et al. - "Machine Learning Force Fields and Coarse-Grained Variables in Molecular Dynamics: Application to Materials and Biological Systems". J. Chem Theor Comput 16(8), 2020. Link
Wan H., Voelz V.A. - "Adaptive Markov State Model estimation using short reseeding trajectories". J Chem Phys 152, 2020. Link
--2019--
Chen S., Wiewiora R.P. et al. - "The dynamic conformational landscape of the protein methyltransferase SETD8". Elife, 2019. Link
Gimenez D., Zhou G. et al. - "Fluorinated Aromatic Monomers as Building Blocks To Control a-Peptoid Conformation and Structure". J of Americ Chem Society 141(8), 2019. Link
Porter J.R., Moeder K.E. et al. - "Cooperative Changes in Solvent Exposure Identify Cryptic Pockets, Switches, and Allosteric Coupling". Biophys Jour 116(5), 2019. Link
Gomes J., Eastman P. et al. - "Classical Quantum Optimization with Neural Network Quantum States". 2nd Workshop on Machine Learn and Phys Sci (NeurIPS), 2019. Link
Zanette C., Bannan C.C. et al. - "Toward Learned Chemical Perception of Force Field Typing Rules". J of Chem Theory Comput 15(1), 2019. Link
Swenson D.W., Prinz J-H. et al. - "OpenPathSampling: A Python Framework for Path Sampling Simulations. 2. Building and Customizing Path Ensembles and Sample Schemes". J of Chem Theory Comput 15(2), 2019. Link
Swenson D.W., Prinz J-H. et al. - "OpenPathSampling: A Python Framework for Path Sampling Simulations. 1. Basics". J of Chem Theory Comput 15(2), 2019. Link
Slochower D.R., Henriksen N.M. et al. - "Binding Thermodynamics of Host-Guest Systems with SMIRNOFF99Frosst 1.0.5 from the Open Force Field Initiative". J of Chem Theory Comput 15(11), 2019.
https://doi.org/10.1021/acs.jctc.9b00748
Wissler H.L., Ehlerding E.B. et al. - "Site-Specific Immuno-PET Tracer to Image PD-L1". Molec Pharm 16(5), 2019. Link
Hanson S.M., Georghiou G. et al. - "What Makes a Kinase Promiscuous for Inhibitors?". Cell Chem Biol 26(3), 2019.
Link
Knoverek C.R., Amarisinghe G.K. et al. - "Advanced Methods for Accessing Protein Shape-Shifting Present New Therapeutic Opportunities". Trends in Biochem Sci 44(4), 2019. Link
--2018--
Rizzi A., Murkli S., Chodera J.D. et al. -"Overview of the SAMPL6 host-guest binding affinity prediction challenge". J of Comput-Aided Molecular Design 32(10), 2018. Link
Eastman P., Shi J., Pande V. et al. - "Solving the RNA design problem with reinforcement learning". Plos Comput Biol 14(6), 2018. Link
Modley D.L., Chodera J.D. et al. - "Escaping Atom Types in Force Fields Using Direct Chemical Perception". J Chem Theor Comput 14(11), 2018. Link
Sun X., Singh S. et al. - "Simulation of spontaneous G protein activation reveals a new intermediate driving GDP unbinding". Elife 7, 2018. Link
Ruff E.F., Muretta J.M. et al. - "A dynamic mechanism for allosteric activation of Aurora kinase A by activation loop phosphorylation". ELife 7, 2018. Link
Feinberg E.N., Sur D., Pande V. et al. - "PotentialNet for Molecular Property Prediction". ACS Cent Sci 4(11), 2018. Link
Husic B.E., McKiernan K., Pande V. et al. - "A minimum variance clustering approach produces robust and interpretable coarse-grained models". J Chem Theory Comput 14(2), 2018. Link
Sultan M.M., Pande V. et al. - "Transferable Neural Networks for Enhanced Sampling of Protein Dynamics". J Chem Theory Comp 14(4), 2018. Link
Sinitskiy A.V., Pande V. - "Theoretical restrictions on longest implicit time scales in Markov state models of biomolecular dynamics". J of Chem Phys 148, 2018. Link
Yang H., Staveness D., Pande V. et al. - "REDOR NMR Reveals Multiple Conformers for a Protein Kinase C Ligand in a Membrane Environment". ACS Cent. Sci. 4(1), 2018. Link
Husic B.E., Pande V. - "Markov State Models: From an Art to a Science". J. Am. Chem. Soc. 140(7), 2018. Link
--2017--
Wiewiora R.P., Chen S. et al. - "Conformational Dynamics of Histone Lysine Methyltransferases by Millisecond-Timescale Molecular Dynamics on Folding@home". Biophys Journal Posters 112(3), 2017. Link
Shi J., Nobrega R.P. et al. - "Atomistic structural ensemble refinement reveals non-native structure stabilizes a sub-millisecond folding intermediate of CheY". Sci Rep 7, 2017. Link
Ryckbosch S.M., Wender P.A., Pande V. - "Molecular dynamics simulations reveal ligand-controlled positioning of a peripheral protein complex in membranes". Nature Communic 8(6), 2017. Link
Sultan M.M., Denny R., Pande V. et al. - "Millisecond dynamics of BTK reveal kinome-wide conformational plasticity within the apo kinase domain". Nature Scientific Report 7(15604), 2017. Link
Husic B.E., Pande V. - "MSM lag time cannot be used for variational model selection". J of Chem Phys 147 (2017).
Link
Eastman P., Swails J, Pande V. et al. - "OpenMM 7: Rapid development of high performance algorithms for molecular dynamics". Plos Comput Biol, 2017. Link
Sultan M., Pande V. - "tICA-Metadynamics: Accelerating Metadynamics by using kinetically selected collective variables". J Chem Theory Comput, 2017. Link
Harrigan M.P., McKiernan K.A, Pande V. et al. - "Markov modeling reveals novel intracellular modulation of the human TREK-2 selectivity filter". Nature - Scient Reports 632, 2017. Link
--2016--
Schwantes C.R., Shukal D., Pande V. - "Markov State Models and tICA Reveal a Nonnative Folding Nucleus in Simulations of NuG2". Biophys J. 110(8), 2016. Link
McKiernan K.A., Wang L.P., Pande V. - "Training and Validation of a Liquid-Crystalline Phospholipid Bilayer Force Field". J Chem Theory Comp 12(12), 2016. Link
Sinitskiy A.V., Stanley N.H., Pande V. et al. - "Computationally Discovered Potentiating Role of Glycans on NMDA Receptors". Nature - Scient Reports 7, 2016. Link
Parton D.L., Grinaway P.B. et al. - "Ensembler: Enabling High-Throughput Molecular Simulations at the Superfamily Scale". PLOS Comput Biol 12(6), 2016. Link
Chodera J.D. - "A Simple Method for Automated Equilibration Detection in Molecular Simulations". J. Chem Theory Comput 12(4), 2016. Link
Hongbin W., Zhou G., Voelz V. - "A Maximum-Caliber Approach to Predicting Perturbed Folding Kinetics Due to Mutations". J Chem Theory and Comp 12(12), 2016. Link
Mukherjee S., Pantelopulos G.A., Voelz V. - "Markov models of the apo-MDM2 lid region reveal diffuse yet two-state binding dynamics and receptor poses for computational docking". Sci Rep 19(6), 2016. Link
Zhou G., Voelz V. - "Using Kinetic Network Models To Probe Non-Native Salt-Bridge Effects on a-Helix Folding". J. Phys. Chem. B 120(5), 2016. Link
--2015--
McGibbon R.T., Pande V. - "Efficient maximum likelihood parameterization of continuous-time Markov processes". J of Chem Phys 143(3), 2015. Link
Qi R., Wang L.P., Pande V. et al. - "United polarizable multipole water model for molecular mechanics simulation". J of Chem Phys 143(1), 2015. Link
Weber J.K., Shukla D., Pande V. - "Heat dissipation guides activation in signaling proteins". Proceeding Nation Acad of Science 112(33), 2015. Link
McGibbon R.T., Beauchamp K.A., Pande V. et al. - "MDTraj: A Modern Open Library for the Analysis of Molecular Dynamics Trajectories". Biophys J. 109(8), 2015. Link
Eastman P., Pande V. - "OpenMM: A Hardware Independent Framework for Molecular Simulations". Comput Sci Eng. 12(4), 2015.
Link
Vanatta D.K., Shukla D., Pande V. - "A network of molecular switches controls the activation of the two-component response regulator NtrC". Nature Communic 6(7283), 2015. Link
Shukla D., Lawrenz M, Pande V. - "Elucidating Ligand-Modulated Conformational Landscape of GPCRs Using Cloud-Computing Approaches". Methods in Enzymol 557, 2015. Link
McGibbon R.T., Pande V. - "Variational cross-validation of slow dynamical modes in molecular kinetics". J of Chem Phys 142(12), 2015. Link
Laury M.L., Wang L-P., Pande V. et al. - "Revised Parameters for the AMOEBA Polarizable Atomic Multipole Water Model". J Phys Chem B 119(29), 2015. Link
Shukla D., Pande V. et al. - "Markov state models provide insights into dynamic modulation of protein function". Acc Chem Res. 48(2), 2015. Link
Lawrenz M, Shukla D., Pande V. - "Cloud computing approaches for prediction of ligand binding poses and pathways". Scient Reports 5(7918), 2015. Link
--2014--
Shukla D., Roux B., Meng Y., Pande V. - "Activation pathway of Src kinase reveals intermediate states as targets for drug design". Nature Communications 5 (3397), 2014. Link
McGibbon R.T., Shwantes C.R., Pande V. - "Statistical Model Selection for Markov Models of Biomolecular Dynamics". J. Phys Chem B. 118(24), 2014. Link
Shukla D., Meng Y, Roux B, Pande V. - "Activation pathway of Src kinase reveals intermediate states as targets for drug design". Nature Communications 5(3397), 2014. Link
Weber J.K., Jack R.L., Schwantes C.R., Pande V. - "Dynamical Phase Transitions Reveal Amyloid-like States on Protein Folding Landscapes". Biophys J. 107(4), 2014. Link
Baiz C.R., Lin Y.S, Peng C.S, Pande V. et al. - "A Molecular Interpretation of 2D IR Protein Folding Experiments with Markov State Models". Biophys J. 106(6), 2014. Link
--2013--
Kohlhoff K.J., Shukla D., Lawrenz M, Pande V. et al. - "Cloud-based simulations on Google Exacycle reveal ligand-modulation of GPCR activation pathways". Nature Chemistry 6, 2013. Link
Mc Gibbon R., Pande V. - "Learning Kinetic Distance Metrics for Markov State Models of Protein Conformational Dynamics". J.Chem. Theory Comput. 9(7), 2013. Link
Gu C., Chang H.W., Maibaum L., Pande V. et al. - "Building Markov State Models with Solvent Dynamics". Bioinfomatics 14(2), 2013. Link
Yao Y, Bowman G.R. et al. - "Hierarchical Nyström methods for constructing Markov state models for conformational dynamics". J Chem Phys 138 (174106), 2013. Link
Schwantes C.R., Pande V. - "Improvements in Markov State Model Construction Reveal Many Non-Native Interactions in the Folding of NTL9". J.Chem. Theory Comput. 9(4), 2013. Link
Weber J.K., Jack R., Pande V. - "Emergence of Glass-like Behavior in Markov State Models of Protein Folding Dynamics". J. Americ. Chem. Soc 135(15), 2013. Link
Qiao Q., Bowman G.R. et al. - "Dynamics of an intrinsically disordered protein reveal metastable conformations that potentially seed aggregation". J. of Amer Chem Soc 135(43), 2013. Link
Lane T.J., Shukla D., Pande V. - "To milliseconds and beyond: challenges in the simulation of protein folding". Curr. Opin. Struct. Biol. 23(1), 2013. Link
Eastman P., Friedrichs M.S., Chodera J.D., Radmer R.J, Pande V. et al. - "OpenMM 4: A Reusable, Extensible, Hardware Independent Library for High Performance Molecular Simulation". J.Chem. Theory Comput. 9(1), 2013. Link
Cronkite-Ratcliff B., Pande V. - "MSMExplorer: Visualizing Markov State Models for Biomolecule Folding Simulations". Bioinformatics 29(7), 2013. Link
--2012--
Lin Y.S., Pande V. - "Effects of familial mutations on the monomer structure of AlfaBeta42". Biophys J. 103(12), 2012. Link
Ring A.M., Lin J.X., Feng D., Mitra S., Pande V. et al. - "Mechanistic and structural insight into the functional dichotomy between IL-2 and IL-15". Nature Immunol. 13(12), 2012. Link
Walker J.R., Novick P.A., Parsons W.H., Pande V. et al. - "Marked difference in saxitoxin and tetrodotoxin affinity for the human nociceptive voltage-gated sodium channel (Nav1.7)". National Academic of Science of USA 109(44), 2012. Link
Bowman G.R. - "Improved coarse-graining of Markov state models via explicit consideration of statistical uncertainty". J Chem Phys 137(134111), 2012. Link
Ring A.M, Lin J-X. et al. - "Mechanistic and structural insight into the functional dichotomy between IL-2 and IL-15". Nature Immunol 13 (1187-1195), 2012. Link
Beauchamp K.A., Mc Gibbon R., Lin Y., Pande V. - "Simple few-state models reveal hidden complexity in protein folding". PNAS 109(44), 2012. Link
Voelz V.A., Jager M., Yao S., Pande V. et al. - "Slow unfolded-state structuring in Acyl-CoA binding protein folding revealed by simulation and experiment". J. Americ. Chem. Soc 134(30), 2012. Link
Bowman G.R., Geissler P.L. - "Equilibrium fluctuations of a single folded protein reveal a multitude of potential cryptic allosteric sites". Pnas 109(29), 2012. Link
Levin A.M., Bates D.L., Ring A.M., Krieg C., Pande V. et al. - "Exploiting a natural conformational switch to engineer an interleukin-2 ‘superkine’". Nature 484 (7395), 2012. Link
Lin Y.S., Bowman G.R., Beauchamp K.A., Pande V. - "Investigating how peptide length and a pathogenic mutation modify the structural ensemble of amyloid beta monomer". Biophys J. 102(2), 2012. Link
Lane J.T., Pande V. - "A Simple Model Predicts Experimental Folding Rates and a Hub-Like Topology". J. Phys.Chem. B 116(23), 2012. Link
Novick P.A., Lopes D.H., Branson K.M. et al. - "Design of Beta-Amyloid Aggregation Inhibitors from a Predicted Structural Motif". J. Medical Chem. 55(7), 2012. Link
--2011--
Rajadas J., Liu C.W., Novick P. et al. - "Rationally designed turn promoting mutation in the amyloid beta-peptide sequence to stabilize oligomers in solution". Plos One 6(7), 2011. Link
Pronk S., Larsson P., Pouya I. et al - "Copernicus: A new paradigm for parallel adaptive molecular dynamics". Conference on High Performance Computing, 2011. Link
Beauchamp K.A., Ensign D.L., Das R., Pande V. - "Quantitative comparison of villin headpiece subdomain simulations and triplet–triplet energy transfer experiments". National Academic of Science of USA 108(31), 2012. Link
Wagoner J.A., Pande V. - "A smoothly decoupled particle interface (SDPI): new methods for coupling explicit and implicit solvent". J. Chem Phys 134(21), 2011. Link
Bowman G.R., Voelz V.A., Pande V. - "Taming the complexity of protein folding". Curr. Opin. Struct. Biol. 21(1), 2011. Link
Bowman G.R., Voelz V.A., Pande V. - "Atomistic folding simulations of the five helix bundle protein Lambda6-85". J. Chem Phys 133(4), 2011. Link
Snow C.D., Aitken C.E., Pande V. - "Non-Bulk-Like Solvent Behavior in the Ribosome Exit Tunnel". PloS Comput Biol. 6(10), 2011. Link
Eastman P., Pande V. - "Speeding development and execution speed with Just In Time GPU code development approaches". Gpu Computing Gems Emerald Edition Book, 2011. Link
Haque I., Pande V. - "Large-scale Chemical Informatics on the GPU". Gpu Computing Gems Emerald Edition Book, 2011. Link
Kasson P.M., Lindahl E., Pande V. - "Water Ordering at Membrane Interfaces Controls Fusion Dynamics". J of American Chem. Society 133(11), 2011. Link
--2010--
Haque I., Pande V. - "Hard Data on Soft Errors: A Large-Scale Assessment of Real-World Error Rates in GPGPU". 10th Cluster, Cloud and Grid Computing Conference, 2010. Link
Pande V., Beauchamp K., Bowman G.R. - "Everything you wanted to know about Markov State Models but were afraid to ask". Methods 52(1), 2010. Link
Bowman G.R, Pande V. - "Protein folded states are kinetic hubs". National Acad of Science of USA 107(38), 2010. Link
Bowman G.R, Ensign D.L., Pande V. - "Enhanced Modeling via Network Theory: Adaptive Sampling of Markov State Models". J of Chem Theory and Comput 6(3). Link
Eastman P, Pande V. - "OpenMM: A Hardware Abstraction Layer for Molecular Simulations". Computing in Science and Engineering 12, 2010. Link
Ponder J.W., Chuanjie W., Ren P., Pande V. et al. - "Current Status of the AMOEBA Polarizable Force Field". J. of Physical Chem. B. 114(8), 2010. Link
Voelz V.A., Singh V.R., Lapidus L.J., Pande V. - "Unfolded state dynamics and structure of protein L characterized by simulation and experiment". J of American Chem. Society 132(13), 2010. Link
Bowman G.R., Pande V. - "Network models for molecular kinetics and their initial applications to human health". Cell Res. 20(6), 2010. Link
DePaul A.J., Thompson E., Pande V et al. - "Equilibrium conformational dynamics in an RNA tetraloop from massively parallel molecular dynamics". Nucleic Acid Res. 38(14), 2010. Link
DePaul A.J., Thompson E., Patel S.S., Sorin E.J. - "Evaluating Molecular Mechanical Potentials for Helical Peptides and Proteins". PloS One 5(4), 2010. Link
Pande V. - "A simple theory of protein folding kinetics". Phys Rev Lett. 105(19), 2010. Link
Bowman G.R., Pande V. - "Protein folded states are kinetic hubs". National Acad of Science of USA 107(38), 2010. Link
Kasson P.M., Lindahl E., Pande V. - "Atomic-Resolution Simulations Predict a Transition State for Vesicle Fusion Defined by Contact of a Few Lipid Tails". PloS One 6(6), 2010. Link
Voelz V.A., Bowman G.R., Beauchamp K., Pande V. - "Molecular Simulation of ab Initio Protein Folding for a Millisecond Folder NTL9(1-39)". J. of American Chem Society 132(5), 2010. Link
--2009--
Bacallado S., Chodera J.D., Pande V. - "Bayesian comparison of Markov models of molecular dynamics with detailed balance constraint". J. Chem Phys. 131(4), 2009. Link
Kasson P.M., Ensign D.L., Pande V. - "Combining Molecular Dynamics with Bayesian Analysis To Predict and Evaluate Ligand-Binding Mutations in Influenza Hemagglutinin". J. of American Chem Society 131(32), 2009. Link
Bowman G.R., Pande V. - "The Roles of Entropy and Kinetics in Structure Prediction". PloS One 4(6), 2009. Link
Larson S.M., Snow C.D., Shirts M., Pande V. - "Folding@home and Genome@Home: Using distributed computing to tackle previously intractable problems in computational biology". ArXiv, 2009. Link
Bowman G.R., Pande V., Huang X. - "Using generalized ensemble simulations and Markov state models to identify conformational states". Methods 49(2), 2009. Link
Beberg A.L., Ensign D.L., Pande V. et al. - "Folding@home: lessons from eight years of distributed computing". IEEE Symposium on Parallel and Distribuited Processing, 2009. Link
Voelz V.A., Luttmann E., Pande V. et al. - "Probing the nanosecond dynamics of a designed three-stranded beta-sheet with massively parallel molecular dynamics simulation". Int. J. Mol. Sci. 10(3), 2009. Link
Voelz V.A., Petrone P., Pande V. - "A multiscale approach to sampling nascent peptide chains in the ribosomal exit tunnel". Pac. Symp. Biocomputing, 2009. Link
Ensign D.L., Pande V. - "The Fip35 WW Domain Folds with Structural and Mechanistic Heterogeneity in Molecular Dynamics Simulations". Biophys J. 96(8), 2009. Link
Friedrichs M.S, Eastman P., Pande V. et al. - "Accelerating Molecular Dynamic Simulation on Graphics Processing Units". J. Comput. Chem. 30(6), 2009. Link
Kelley N.W., Huang X., Frydman J, Pande V. - "The predicted structure of the headpiece of the Huntingtin protein and its implications on Huntingtin aggregation". J. Molec. Biol. 388(5), 2009. Link
Kasson P.M., Pande V. - "Combining Mutual Information with Structural Analysis to Screen for Functionally Important Residues in Influenza Hemagglutinin". Pac. Symp. Biocomputing, 2009. Link
Luttmann E., Ensign D.L., Pande V. et al. - "Accelerating Molecular Dynamic Simulation on the Cell processor and PlayStation 3". J. Comput. Chem. 30(2), 2009. Link
Petrone P.M., Snow C.D., Pande V. - "Side-chain recognition and gating in the ribosome exit tunnel". National Acad. of Science of USA 105(43), 2009. Link
--2008--
Kelley N.W., Vishal V., Krafft G.A., Pande V. - "Simulating oligomerization at experimental concentrations and long timescales: A Markov state model approach". J. Chem Phys. 129(21), 2008. Link
Bowman G.R., Huang X., Yao Y., Pande V. et al. - "Structural Insight into RNA Hairpin Folding Intermediates". J. of American Chem Society 130(30), 2008. Link
Huang X, Bowman G.R., Pande V. - "Convergence of folding free energy landscapes via application of enhanced sampling methods in a distributed computing environment". J. Chem Phys. 128(20), 2008. Link
--2007--
Elsen E., Vishal V., Houston M., Pande V. et al. - "N-Body simulation on GPUs". ArXiv, 2007. Link
Hinrichs N.S., Pande V. - "Calculation of the distribution of eigenvalues and eigenvectors in Markovian state models for molecular dynamics". J. Chem Phys. 126(24), 2007. Link
Ensign D.L., Kasson P.M., Pande V. - "Heterogeneity Even at the Speed Limit of Folding: Large-scale Molecular Dynamics Study of a Fast-folding Variant of the Villin Headpiece". J. Molec. Biol. 374(3), 2007. Link
Kasson P.M., Pande V. - "Control of Membrane Fusion Mechanism by Lipid Composition: Predictions from Ensemble Molecular Dynamics". PloS Comput. Biol. 3(11), 2007. Link
Kasson P.M., Zomorodian A., Park S., Pande V. et al. - "Persistent voids: a new structural metric for membrane fusion". Bioinformatics 23(14), 2007. Link
Del Lucent, Vishal V., Pande V. - "Protein folding under confinement: a role for solvent". National Acad. of Science of USA 104(25), 2007. Link
Chodera J.D., Singhal N., Pande V. et al. - "Automatic discovery of metastable states for the construction of Markov models of macromolecular conformational dynamics". J. Chem Phys. 126(15), 2007. Link
Beberg A.L., Pande V. - "Storage@home: Petascale Distributed Storage". IEEE International Parallel and Distributed Processing Symposium, 2007. Link
Kasson P.M., Pande V. - "Predicting structure and dynamics of loosely-ordered protein complexes: influenza hemagglutinin fusion peptide". Pac Symp Biocomp 2007. Link
--2006--
Park S., Ensign D.L., Pande V. - "A Bayesian Update Method for Adaptive Weighted Sampling". Phys. Rev. E 74, 2006. Link
Jayachandran G., Vishal V, Garcia A.E., Pande V. - "Local structure formation in simulations of two small proteins". J. Struct. Biol. 157(3), 2006. Link
Snow C.D., Rhee Y.M., Pande V. - "Kinetic Definition of Protein Folding Transition State Ensembles and Reaction Coordinates". Biophys J. 91(1), 2006. Link
Jayachandran G., Shirts M.R., Pande V. - "Parallelized Over Parts Computation of Absolute Binding Free Energy with Docking and Molecular Dynamics". J. of Chem Phys 125, 2006. Link
Jayachandran G., Shirts M.R., Pande V. - "Folding Simulations of the Villin Headpiece in All-Atom Detail". J. of Chem Phys 124, 2006. Link
Kasson P.M., Kelley N.W., Pande V. et al. - "Ensemble molecular dynamics yields submillisecond kinetics and intermediates of membrane fusion". National Acad of Science of USA 103(32), 2006. Link
Suydam I.T., Snow C.D., Boxer S.G, Pande V. - "Electric Fields at the Active Site of an Enzyme: Direct Comparison of Experiment with Theory". Science 313(5784), 2006. Link
Chong L.T., Swope W.C., Pitera J.W, Pande V. - "Kinetic Computational Alanine Scanning: Application to p53 Oligomerization". J. Molec. Biol. 357(3), 2006. Link
Park S., Pande V. - "Validation of Markov state models using Shannon’s entropy". J. Chem. Phys 124(5), 2006. Link
Rhee Y.M., Pande V. - "On the role of chemical detail in simulating protein folding kinetics". Chem Phys 323, 2006. Link
Sorin E.J., Pande V. - "Nanotube confinement denatures protein helices". J. of American Chem Society 128(19), 2006. Link
--2005--
Sorin E.J., Rhee Y.M., Shirts M.R., Pande V. - "The solvation interface is a determining factor in peptide conformational preferences". J. Molec. Biol. 356(1), 2005. Link
Petrone P., Pande V. - "Can conformational change be described by only a few normal modes?". Biophys J. 90(5), 2005. Link
Zagrovic B., Jayach G., Millet I.S., Doniach S., Pande V. - "How large is alpha-helix in solution? Studies of the radii of gyration of helical peptides by SAXS and MD". J. Molec. Biol. 353(2), 2005. Link
Singhal N., Pande V. - "Error Analysis in Markovian State Models for protein folding". J. Chem. Phys 123(12), 2005. Link
Fujitani H., Tanida Y., Ito M., Pande V. et al. - "Direct calculation of the binding free energies of FKBP ligands". J. Chem. Phys 123(8), 2005. Link
Park S., Radmer R.J., Klein T.E., Pande V. - "A New Set of Molecular Mechanics Parameters for Hydroxyproline and Its Use in Molecular Dynamics Simulations of Collagen-Like Peptides". J. Comput. Chem. 26(15), 2005. Link
Shirts M.R., Pande V. - "Comparison of efficiency and bias of free energies computed by exponential averaging, the Bennett acceptance ratio, and thermodynamic integration". J. Chem. Phys 122(14), 2005. Link
Shirts M.R., Pande V. - "Solvation free energies of amino acid side chain analogs for common molecular mechanics water models". J. Chem. Phys 122(13), 2005. Link
Elmer S.P., Park S., Pande V. - "Foldamer dynamics expressed via Markov state models. I. Explicit solvent molecular-dynamics simulations in acetonitrile, chloroform, methanol, and water". J. Chem. Phys 123(11), 2005. Link
Elmer S.P., Park S., Pande V. - "Foldamer dynamics expressed via Markov state models. II. State space decomposition". J. Chem. Phys 123(11), 2005. Link
Zagrovic B., Lipfert J., Sorin E.J., Pande V. et al. - "Unusual compactness of a polyproline type II structure". National Acad of Science of USA 102(33), 2005. Link
Snow C.D., Sorin E.J., Rhee Y.M., Pande V. - "How well can simulation predict protein folding kinetics and thermodynamics?". Annual Review of Biophy and Biomolec Struct 34, 2005. Link
Sorin E.J., Pande V. - "Empirical Force-Field Assessment: The Interplay Between Backbone Torsions and Noncovalent Term Scaling". J. Comput. Chem. 26(7), 2005. Link
Sorin E.J., Pande V. - "Exploring the Helix-Coil Transition via All-atom Equilibrium Ensemble Simulations". Biophys J. 88(4), 2005. Link
Sorin E.J., Rhee Y.M., Pande V. - "Does Water Play a Structural Role in the Folding of Small Nucleic Acids?". Biophys J. 88(4), 2005. Link
Chong L.T., Snow C.D., Rhee Y.M., Pande V. - "Dimerization of the p53 Oligomerization Domain: Identification of a Folding Nucleus by Molecular Dynamics Simulations". J. Molec. Biol. 345(4), 2005. Link
--2004--
Singhal N., Snow C.D., Pande V. - "Using path sampling to build better Markovian state models: Predicting the folding rate and mechanism of a tryptophan zipper beta hairpin". J. Chem. Phys 121(1), 2004. Link
Sorin E.J., Rhee Y.M., Pande V. et al. - "Simulations of the role of water in the protein-folding mechanism". National Acad of Science of USA 101 (17), 2004. Link
Snow C.D., Qiu L., Du D., Gai F., Hagen S.J., Pande V. - "Trp zipper folding kinetics by molecular dynamics and temperature-jump spectroscopy". National Acad of Science of USA 101(12), 2004. Link
Sorin E.J., Rhee Y.M., Vishal V., Pande V. et al. - "Does Native State Topology Determine the RNA Folding Mechanism?". J. Molec. Biol. 337(4), 2004. Link
--2003--
Zagrovic B., Pande V. - "Structural correspondence between the alpha-helix and the random-flight chain resolves how unfolded proteins can have native-like properties". Nat. Struc. Biol. 10(11), 2003. Link
Shirts M.R., Bair E., Hooker G., Pande V. - "Equilibrium Free Energies from Nonequilibrium Measurements Using Maximum-Likelihood Methods". Phys. Rev. Lett. 91(14), 2003. Link
Shirts M.R., Pitera J.W., Swope W:C., Pande V. - "Extremely precise free energy calculations of amino acid side chain analogs: Comparison of common molecular mechanics force fields for proteins". J. Chem. Phys. 119(11), 2003. Link
Zagrovic B., Pande V. - "Solvent Viscosity Dependence of the Folding Rate of a Small Protein: Distributed Computing Study". J. Comput. Chem. 24(12), 2003. Link
Sorin E.J., Rhee Y.M., Nakatani B.J., Pande V. - "Insights Into Nucleic Acid Conformational Dynamics from Massively Parallel Stochastic Simulations". Biophys. J. 85(2), 2003. Link
Pande V., Baker I, Chapma J., Elmer S.P. et al. - "Atomistic protein folding simulations on the submillisecond timescale using worldwide distributed computing". Biopolymers 68(1), 2003. Link
Rhee Y.M., Pande V. - "Multiplexed-Replica Exchange Molecular Dynamics Method for Protein Folding Simulation". Biophys. J. 84(2 pt1), 2003. Link
--2002--
Snow C.D., Zagrovic B., Pande V. - "The Trp Cage: Folding Kinetics and Unfolded State Topology via Molecular Dynamics Simulations". J. of American Chem Society 124(49), 2002. Link
Snow C.D., Nguyen H., Pande V., Grubele M. - "Absolute comparison of simulated and experimental protein-folding dynamics". Nature 420(6911), 2002. Link
Zagrovic B., Snow C.D., Khaliq S., Shirts M.R., Pande V. - "Native-like Mean Structure in the Unfolded Ensemble of Small Proteins". J. Molec. Biol. 323(1), 2002. Link
Zagrovic B., Snow C.D., Shirts M.R., Pande V. - "Simulation of Folding of a Small Alpha-helical Protein in Atomistic Detail using Worldwidedistributed Computing". J. Molec. Biol. 323(5), 2002. Link
--2001--
Zagrovic B., Sorin E.J., Pande V. - "Beta-Hairpin Folding Simulations in Atomistic Detail Using an Implicit Solvent Model". J. Molec. Biol. 313(1), 2001. Link
Shirts M.R., Pande V. - "Mathematical Foundations of ensemble dynamics". Phys. Rev. Lett. 86, 2001. Link
--2000--
Shirts M.R., Pande V. - "Screen savers of the world, Unite!". Science 290(5498), 2000. Link

2025 - 2024 - 2023 - 2022 - 2020 - 2019 - 2018 - 2017 - 2016 - 2014 - 2013 - 2012 - 2011 - 2010 - About Foldit
--2025--
Scott T., Moretti R. et al. - "Drugit: crowd-sourcing molecular design of non-peptidic VHL binders". Nat Commun 16(3548), 2025. Link
Petrides A.C., Joosten R.P. et al. - "Reconstructing Biological Molecules with Help from Video Gamers". Acta Crystallogr D Struct Biol 81(11), 2025. Link
--2024--
Castro M., Katubig E. - "Determining the Catalytic Efficiency of ß-Glucosidase B (BglB) H328N Mutant". URES 2024. Link
Drigghers J. - "Comparison of Foldit Calculated Stability with Experimentally Determined Energy Values of Cytochrome C Mutants". Curca 2024. Link
Ahlstedt C., Bennet A. et al. - "Design to Data for mutants of ß-glucosidasi B from Paenibacillus polymyxa: L171M, H178M, M221L, E406W, N160E, F415M". Lux et Fide 2, 2024. Link
Wakelin D.J. - "New to Nature C–C bond Forming Cyclases: Pushing the Boundaries of ring Forming Reactions". Phd Thesis, 2024. Link
--2023--
Guan E., Fu Y. -"Fold It: Creating Foldable 3D Volumes From Planar 2D Surfaces". 8th ACM Symp on Comput Fabric, 2023. Link
Ponce S., Gordon K. - "Characterizing the Enzymatic Activity and Thermostability of Protein ß-Glucosidase B (BglB) Mutant Y118F". CELTS Undergraduate Research and Engagement, 2023. Link
--2022--
Sahtoe D.D., Praetorius F. et al. - "Reconfigurable asymmetric protein assemblies through implicit negative design". Science 375(6578), 2022. Link
--2020--
Panou D.N., Reczko M. - "DeepFoldit -- A Deep Reinforcement Learning Neural Network Folding Proteins". Arxiv, 2020. Link
Norn C., Juergens D. et al. - "Protein sequence design by explicit energy landscape optimization". Biorxiv, 2020. Link
Liu Y., Moretti R. et al. - "Foldit Drug Design Game Usability Study: Comparison of Citizen and Expert Scientists". Proc of Motion, Interaction and Games 2020. Link
Miller J.A., Khatib F. et al. - "Introducing Foldit Education Mode". Nature Struct and Molec Biol 27 (769-770), 2020. Link
--2019--
Khatib F., Desfosses A. et al. - "Building de novo cryo-electron microscopy structures collaboratively with citizen scientists". Plos Biology 17(11), 2019. Link
Koepnick B., Flatten J. et al. - "De novo protein design by citizen scientists". Nature 570 (390-394), 2019. Link
Dsilva L., Mittal S. et al. - "Creating Custom Foldit Puzzles for Teaching Biochemistry". Biochem and Molec Biol Educ 47(2), 2019. Link
Muender T., Gulani S.A. et al. - "Comparison of mouse and multi-touch for protein structure manipulation in a citizen science game interface". Jour of Science Communic 18(1), 2019. Link
--2018--
Cooper S., Sterling A.L. et al. - "Repurposing citizen science games as software tools for professional scientists". 13th Int Conf on the Foundations of Digital Games (Article 39), 2018. Link
Cooper S., Horn B. et al. - "A Monte Carlo Approach toSkill-Based Automated Playtesting". Proc of 14th Artificial Intell and Interact Game, 2018. Link
Ponti M., Stankovic I. et al. - "Chefs Know More than Just Recipes: Professional Vision in a Citizen Science Game". Human Computation 5, 2018. Link
Keasar C., Crivelli S., Foldit Players et al. - "An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12". Nature Scientif Rep 8(9939), 2018. Link
--2017--
Bauer A., Popovic Z. - "Collaborative Problem Solving in an Open-Ended Scientific Discovery Game". Proc of ACM Human-Comput Interact 1(22), 2017. Link
Kleffner R., Flatten J., Baker D. et al. - "Foldit Standalone: a video game-derived protein structure manipulation interface using Rosetta". Bionformatics 33(17), 2017. Link
--2016--
Cooper S., Deterding S., Tsapakos T. - "Player Rating Systems for Balancing Human Computation Games: Testing the Effect of Bipartiteness". 1st DIGRA/FDG Conf, 2016. Link
Hsiao D.Y., Cooper S., Popovic Z. et al. - "Proactive Sensing for Improving Hand Pose Estimation". Conf on Human Computer Interact (CHI), 2016. Link
Yee J.A. - "Characterizing crowd participation and productivity of foldit through web scraping". Phd Thesis, 2016. Link
Horowitz S., Koepnick B., Foldit playest et al. - "Determining crystal structures through crowdsourcing and coursework". Nature Comunic 7(12549), 2016. Link
--2014--
Khoury G.A., Liwo A., Khatib F., Zhou H., Foldit players et al. - "WeFold: A Coopetition for Protein Structure Prediction". Proteins:Structure,Function and Bioinformatics 82, 2014. Link
Hsiao D.Y., Cooper S., Popovic Z. et al. - "User Behavior Transformation through Dynamic Input Mappings". Foundation of digital games, 2014. Link
--2013--
Cooper S., Khatib F., Baker D. - "Increasing Public Involvement in Structural Biology". Structure 21(9), 2013. Link
--2012--
Eiben C.B., Siegel J.B., Bale J.B., Cooper S., Baker D., Foldit players et al. - "Increased Diels-Alderase activity through backbone remodeling guided by Foldit players". Nature Biotechnology 30(2), 2012. Link
Khoury G.A., Khatib F., Zhou H, Foldit players et al. - "Hybrid Human Protein Structure Prediction via the Online Multiplayer Game Foldit Coupled with an Iterative Clustering Approach for Selection of Near-Native Structures, Knowledge-Based Refinement, and State-of-the-Art Scoring Functions". CASP10, 2012. Link
Bortot L.O., Faccioli R.A., Foldit players et al. - "WeFold community . Application of Replica Exchange Molecular Dynamics with Implicit Solvation for Refinement of Collaboratively Generated and Ranked Models". CASP 10 Meeting, 2012. Link
--2011--
Cooper S. - "A Framework for Scientific Discovery through Video Games". Phd Thesis, 2011. Link
Cooper S., Khatib F., Makedon I., Barbero J., Baker D., Foldit players et al. - "Analysis of social gameplay macros in the Foldit cookbook". 6th International Conference on the Foundations of Digital Games, 2011. Link
Gilski M., Kazmierczyk M., Krzywda S., Zábranská H., Cooper S."High-resolution structure of a retroviral protease folded as a monomer". Acta Crystallographica D67, 2011. Link
Khatib F., Cooper S., Tyka M.D., Xu K., Makedon I., Popovic Z., Baker D., Foldit players - "Algorithm discovery by protein folding game players". National Academy of Sciences of USA 108(47), 2011. Link
Khatib F., DiMaio F., Cooper S., Kazmierczyk M., Foldit players et al. - "Crystal structure of a monomeric retroviral protease solved by protein folding game players". Nature Structural and Molecular Biology 18, 2011. Link
--2010--
Cooper S., Khatib F., Treuille A., Baker D., Foldit players et al. - "Predicting protein structures with a multiplayer online game". Nature 466, 2010. Link
Cooper S., Treuille A., Barbero J., Leaver-Fay A., Baker D., Foldit players et al. - "The challenge of designing scientific discovery games". 5th International Conference on the Foundations of Digital Games, 2010. Link
Sujatmika S., Masykuri M. et al. - "Fostering Critical Thinking Skills: The Role of Simulations in Science Education". Bulletin Edukasi Indonesia 3(03), 2024. Link
Miller J.A., Buse K. et al. - "Wrapped in Story: The Affordances of Narrative for Citizen Science Games". 18th Intern Conf on the Found of Digital Games 33, 2023. Link
Milburn C., Buse K. et al. - "Join the Fold: Video Games, Science Fiction, and the Refolding of Citizen Science". Desing Issues 39(1), 2023. Link
Zahra T. - "Pivoting from Laboratory to Remote Research Using the Online Game Foldit". Scholarship and Practice of Undergrad Research 4(4), 2021. Link
Ballard E. - "What Is FoldIt?". Ideas: Catalog for the Honor College 5, 2021. Link
Panou D.N., Rezcko M. - "DeepFoldit - A Deep Reinforcement Learning Neural Network Folding Proteins". Arxiv, 2020.
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Das R., Keep B. et al. - "Scientific Discovery Games forBiomedical Research". Annual Review of Biomed Data Science 2(253), 2019. Link
Curtis V. - "Exploring Online Citizen Science in Depth: A Tale of Three Projects". Online Cit Science and Widening of Academia Book, 2018. Link
Ponti M., Hillman T. et al. - "Getting it Right or Being Top Rank: Games in Citizen Science". Citizen Science: Theory and Practice 3(1), 2018. Link
Ponti M., Stankovic I. - "Chefs Know More than Just Recipes: Professional Vision in a Citizen Science Game". Human Computation 5, 2018. Link
Gaston J., Cooper S. - "To Three or not to Three: Improving Human Computation Game Onboarding with a Three-Star System". Proc of the 2017 CHI Conf on Human Factors in Comp Systems, 2017. Link
Ponti M., Hilman T. et al. - "Science and Gamification: The Odd Couple?". Proc of the 2015 Ann Symp on Computer-Human Interaction in Play, 2015. Link
Curtis V. - "Motivation to Participate in an Online Citizen Science Game A Study of Foldit". Science Commun 37(6), 2015. Link
Parslow G.R. - "Commentary: crowdsourcing, Foldit, and scientific discovery games". Biochem Mol. Biol. Educ 41(2), 2013. Link
Farley P.C. - "Using the computer game "FoldIt" to entice students to explore external representations of protein structure in a biochemistry course for nonmajors". Biochem Mol. Biol. Educ 41(1), 2013. Link
Good B.M., Al S. - "Games with a scientific purpose". Genome Biol. 12(12), 2011. Link

Ibrahim M. - "On the Eight Levels theorem and applications towards Lucas-Lehmer primality test for Mersenne primes, I". Arab J of Basic and Applied Science 30, 2023. Link
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Konich K, Nikitin I., Klimenko S. et al. - "Radio Astronomical Monitoring in Virtual Environment". Procedia Computer Science 66, 2015. Link
Nikitin I. - "Statistical analysis of narrow-band signals at setilive.org". In Press. Link
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Ali M., Falkenhain K. et al. - "VEGF signalling causes stalls in brain capillaries and reduces cerebral blood flow in Alzheimer’s mice". Brain (Awab387), 2022. Link
Nugent J. - "Accelerating Alzheimer’s Research With Stall Catchers". The Science Teacher 88(4), 2021. Link
Solovyev R., Kalinin A.A. et al. - "3D Convolutional Neural Networks for Stalled Brain Capillary Detection". Arxiv 2021.
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Ali M., Falkenhain K. et al. - "Inhibition of peripheral VEGF signaling rapidly reduces leucocyte obstructions in brain capillaries and improves cortical blood flow in an Alzheimer’s disease mouse model". ALZ & Dementia Journ 16(S3), 2020. Link
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Falkenhain K., Ruiz-Uribe N. et al. - "A pilot study investigating the effects of voluntary exercise on capillary stalling and cerebral blood flow in the APP/PS1 mouse model of Alzheimer’s disease". Link
Nuget J. - "Game for good with Stall Catchers citizen science". Science Scope 42(7), 2019. Link

2024 - 2017 - 2014 - 2013 - 2011 - 2010 - 2009 - 2007- 2005
--2024--
Zolensky M. - "Curation of Comet 81P/Wild 2 Coma Dust and Fresh Interstellar Dust From the Stardust Mission". EXMAG Meeting, 2024. Link
--2017--
Westphal A.J., Trieloff M. - "More than 30 000 volunteers involved in identification of tiny rare interstellar dust particle candidates collected by the Stardust mission". Heidelberg Jarbucher BD.2, 2017. Link
--2014--
Westphal A.J., Bechtel H.A., Brenker F.E. et al. - "Final reports of the Stardust Interstellar Preliminary Examination". Meteoritics & Planetary Science 49 (9), 2014. Link
Stroud R.M., Allen C., Ansari A. et al. - "Stardust Interstellar Preliminary Examination XI: Identification and elemental analysis of impact craters on Al foils from the Stardust Interstellar Dust Collector". Meteoritics & Planetary Science 49 (9), 2014. Link
Sterken V.J., Westphal A.J., Altobelli N. - "Stardust Interstellar Preliminary Examination X: Impact speeds and directions of interstellar grains on the Stardust dust collector". Meteoritics & Planetary Science 49 (9), 2014. Link
Postberg F., Hillier J.K., Armes S.P. et al. - "Stardust Interstellar Preliminary Examination IX: High-speed interstellar dust analog capture in Stardust flight-spare aerogel". Meteoritics & Planetary Science 49 (9), 2014. Link
Gainsforth Z., Brenker F.E., Simionovici A.S. et al. - "Stardust Interstellar Preliminary Examination VIII: Identification of crystalline material in two interstellar candidates". Meteoritics & Planetary Science 49 (9), 2014. Link
Flynn G.J., Sutton S.R. et al. - "Stardust Interstellar Preliminary Examination VII: Synchrotron X-ray fluorescence analysis of six Stardust interstellar candidates measured with the Advanced Photon Source 2-ID-D microprobe". Meteoritics & Planetary Science 49 (9), 2014. Link
Simionovici A.S., Lamelle L. et al. - "Stardust Interstellar Preliminary Examination VI: Quantitative elemental analysis by synchrotron X-ray fluorescence nanoimaging of eight impact features in aerogel". Meteoritics & Planetary Science 49 (9), 2014. Link
Brenker F.E., Westphal A.J., Vincze L. et al. - "Stardust Interstellar Preliminary Examination V: XRF analyses of interstellar dust candidates at ESRF ID13". Meteoritics & Planetary Science 49 (9), 2014. Link
Buttherworth A., Westphal A.J., Tyliszczak T. et al. - "Stardust Interstellar Preliminary Examination IV: Scanning transmission X-ray microscopy analyses of impact features in the Stardust Interstellar Dust Collector". Meteoritics & Planetary Science 49 (9), 2014. Link
Bechtel H.A., Flynn G.J., Allen C. et al. - "Stardust Interstellar Preliminary Examination III: Infrared spectroscopic analysis of interstellar dust candidates". Meteoritics & Planetary Science 49 (9), 2014. Link
Frank D.R., Westphal A.J., Zolensky M.E. et al. - "Stardust Interstellar Preliminary Examination II: Curating the interstellar dust collector, picokeystones, and sources of impact tracks".Meteoritics & Planetary Science 49 (9), 2014. Link
Westphal A.J., Anderson D.A., Buttherworth A. et al. - "Stardust Interstellar Preliminary Examination I: Identification of tracks in aerogel". Meteoritics & Planetary Science 49 (9), 2014. Link
Westphal A.J., Stroud R.M, Bechtel H.A. et al. - "Evidence for interstellar origin of seven dust particles collected by the Stardust spacecraft". Science 345(6198), 2014. Link
--2013--
Westphal A.J., De Gregorio B., Lettieri R. et al. - "Community Supported Stardust Compendia". NASA Technical Report 20130004203, 2013. Link
--2011--
Westphal A.J., Allen C., Bajt S. et al. - "Constraints on the Interstellar Dust Flux Based on Stardust@Home Search Results". 42th NASA Lunar and Planetary Science Conference, 2011. Link
--2010--
Westphal A.J., Buttherworth A., Frank D. et al. - "Discovery of Interstellar Dust Candidates in Stardust aerogel collectors through Stardust@home". Fall Meeting of American Geophysical Union, 2010. Link
Westphal A.J., Allen C. et al. - "Two interstellar dust candidates from the stardust aerogel interstellar dust collector". Meteoritics and Planetary Science Supplement 73(5302), 2010. Link
--2009--
Westphal A.J., Allen C., Bajt S. et al. - "Stardust Interstellar Preliminary Examination (ISPE)". 40th NASA Lunar and Planetary Science Conference, 2009. Link
--2007--
Westphal A.J., Bastien R.K. et al. - "Search for Conteporary Interstellar Dust in the Stardust Collector". 38th NASA Lunar and Planetary Science Conference, 2007. Link
--2005--
Westphal A.J., Buttherworth A., Snead C.J. et al. - "Stardust@home: A Massively Distributed Public Search for Interstellar Dust in the Stardust Interstellar Dust Collector". 36th NASA Lunar and Planetary Science Conference, 2005. Link

Good B.M., Loguercio S., Griffith O.L., Nanis M. et al. - "The Cure: Design and Evaluation of a Crowdsourcing Game for Gene Selection for Breast Cancer Survival Prediction". JMIR Serious Games 2(2), 2014. Link
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Sparks N., Toumi R. - "Climate change attribution of Typhoon Haiyan with the Imperial College Storm Model". Atmospheric Science Letters 26(1), 2025.Link
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GalaxyZoo + Cell Slider + SolarStorm Watch + Old Weather + Milky Way + Planet Hunter + Higgs Hunter + Cairo Geniza + Etch a Cell + About ZooUniverse
Progetti "GalaxyZoo/GalaxyZoo 2/GalaxyZoo Supernova/GalaxyZoo Hubble/RadioGalaxy Zoo/MoonZoo/Galaxy Nurseries"
2026 - 2025 - 2024 - 2023 - 2022 - 2021 - 2020 - 2019 - 2018 - 2017 - 2016 - 2015 - 2014 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008
--2026--
Pearson J., Dickinson H. et al. - "Galaxy Zoo: Cosmic Dawn–morphological classifications for over 41 000 galaxies in the Euclid Deep Field North from the Hawaii Two-0 Cosmic Dawn survey". Monthly Not. of the Royal Astron. Soc. 546(3), 2026. Link
--2025--
Mazziotti N. - "Identifying diffuse galaxies through citizen science". PHD Thesis, 2025. Link
Smerthurst R - "Galaxy Zoo JWST: up to 75 per cent of discs are featureless at 3 < z < 7". Monthly Not. of the Royal Astron. Soc. 539(2), 2025. Link
Agrawal T., Verrico M.E. et al. - "Morphologies of Changing Look Active Galactic Nuclei Host Galaxies in Galaxy Zoo". Research Notes of AAS 9(9), 2025. Link
Starkman N., Nibauer J. et al. - "A Zooniverse of Stellar Streams: First Look at Dark Matter Halos in Euclid". Bulletin of the American Astr Society 57(3), 2025. Link
Wong O.I., Garon A.F. et al. - "Radio Galaxy Zoo data release 1: 100185 radio source classifications from the FIRST and ATLAS surveys". Monthly Not. of the Royal Astron. Soc. 536(4), 2025. Link
Xue G., Yi-Zhou G. et al. - "The connections among morphology, environment, and star formation with Galaxy Zoo Hubble". Monthly Not. of the Royal Astron. Soc. 536(1), 2025. Link
Ye R., Shen S. et al. - "From Galaxy Zoo DECaLS to BASS/MzLS: detailed galaxy morphology classification with unsupervised domain adaption". Monthly Not. of the Royal Astron. Soc. 537(2), 2025. Link
Chrobáková Z., Krešňáková V. et al. - "Deep learning-based detection and segmentation of edge-on and highly inclined galaxies". Astronom Society of the Pacific 137(3), 2025. Link
De Beer G. - "Characterising radio sources in the Small Magellanic Cloud using citizen science and optical spectroscopy". Phd Thesis, 2025. Link
Wolf-Chase G., Kerton C. et al. - "Crowdsourcing star-formation research and the power of participatory science". Astrophys Space Sci 370(93), 2025.Link
Dey S., Jones M.G. et al. - "Citizen Science Identification of Isolated Blue Stellar Systems in the Virgo Cluster". The Astrophy J. 983(2), 2025. Link
--2024--
Crosset J.P., Jaffè Y. et al. - "Identification of ram pressure stripping features in galaxies using citizen science". Astron&Astrophys 694(A204), 2024.Link
Smith B.J., Watson M. et al. - "Grand Design versus Multiarmed Spiral Galaxies: Dependence on Galaxy Structure". The Astronom J 168(1), 2024. Link
Waghumbare A., Kasera S. et al. - "DIAT-DSCNN-ECA-Net: separable convolutional neural network-based classification of galaxy morphology". Astrophys Space Sci 369(38), 2024. Link
Keel W., Moiseev A. et al. - "The 2nd Galaxy Zoo search for distant EELRs around extant and fading AGN: 40 new Voorwerpjes". Bulletin of the American Astr Society 56(2), 2024. Link
Masters K.L., Gallway M. et al. - "Galaxy Zoo: Morphologies Based on UKIDSS NIR Imaging for 71,052 Galaxies". Res. Notes AAS 8(198), 2024. Link
Kameswara M., Fortson L. et al. - "Galaxy Zoo: Weird & Wonderful - Towards an effective human-machine collaborative anomaly detection framework". Bulletin of the American Astr Society 56(2), 2024. Link
Adrianomena S., Tang H. - "Radio Galaxy Zoo: Leveraging latent space representations from variational autoencoder". J of Cosmology and Astropart Phys 2024, 2024. Link
Slikepcevic I., Scaife A.M. et al. - "Radio galaxy zoo: towards building the first multipurpose foundation model for radio astronomy with self-supervised learning". RAS Techniques and Instruments 3(1), 2024. Link
Garland I.L., Walmsley M. et al. - "Galaxy Zoo DESI: large-scale bars as a secular mechanism for triggering AGNs". Monthly Not. of the Royal Astron. Soc. 532(2), 2024. Link
--2023--
Bowles M., Tang H. et al. - "Radio galaxy zoo EMU: towards a semantic radio galaxy morphology taxonomy". Monthly Not. of the Royal Astron. Soc. 522(2), 2023. Link
Porter L.E., Holwerda B.W. et al - "The loneliest galaxies in the Universe: a GAMA and Galaxy Zoo study on void galaxy morphology". Monthly Not. of the Royal Astron. Soc. 524(4), 2023. Link
Chen D., Kerai V. et al. - "Radio Galaxy Zoo: Tagging radio subjects using text". Publ of Astronom Society of Australia 40, 2023. Link
Geron T., Lintott C. et al. - "Galaxy Zoo: kinematics of strongly and weakly barred galaxies". Monthly Not. of the Royal Astron. Soc. 521(2), 2023. Link
Walmsley M.,Geron T. et al. - "Galaxy Zoo DESI: Detailed morphology measurements for 8.7M galaxies in the DESI Legacy Imaging Surveys". Monthly Not. of the Royal Astron. Soc. 526(3), 2023. Link
--2022--
Slijpievic Inigo V., Scaife A. M. M. et al. - "Radio Galaxy Zoo: using semi-supervised learning to leverage large unlabelled data sets for radio galaxy classification under data set shift". Monthly Not. of the Royal Astron. Soc. 514(2), 2022. Link
Porter-Temple R., Holwerda B.W. et al. - "Galaxy And Mass Assembly: Galaxy Zoo spiral arms and star formation rates". Monthly Not. of the Royal Astron. Soc. 515(3), 2022. Link
Porter L.R. - "The loneliest galaxies in the Universe: a Gama and galaxy zoo study on void galaxy morphology". Phd Thesis, 2022. Link
Vavilova I.B., Khramtsov V. et al. - "VizieR Online Data Catalog: Galaxies at 0.02<z<0.1 morphological catalog". Space Science & Technology 28(1), 2022. Link
Wei S., Li Y. et al. - "Unsupervised Galaxy Morphological Visual Representation with Deep Contrastive Learning". Astron Soc of Pacific 134(1041), 2022. Link
Hall X., Miller A. - "Using the Zooniverse to Produce a Catalog of 277 Type II SNe from the Bright Transient Survey". AAS Bulletin 54(6), 2022. Link
Masters K.L., Todd A. et al. - "Galaxy Zoo: 3D – crowdsourced bar, spiral, and foreground star masks for MaNGA target galaxies". Monthly Not. of the Royal Astron. Soc. 507(3), 2022. Link
Keel C.W., Tate J. et al. - "Gems of the Galaxy Zoos—A Wide-ranging Hubble Space Telescope Gap-filler Program". The Astroph J 163(4), 2022. Link
Adams D., Metha V. et al. - "Galaxy Zoo: Clump Scout: Surveying the Local Universe for Giant Star-forming Clumps". The Astroph J 931(1), 2022. Link
Smethurs R.J., Masters K.L. et al. - "Quantifying the poor purity and completeness of morphological samples selected by galaxy colour". Monthly Not. of the Royal Astron. Soc. 510(3), 2022. Link
Hayat A., Stein G. et al. - "Self-Supervised Representation Learning for Astronomical Images". The Astroph J Letters 911(2), 2022. Link
Walmsey M., Scaife A.M.M. - "Practical Galaxy Morphology Tools from Deep Supervised Representation Learning". Monthly Not. of the Royal Astron. Soc. 513(2), 2022. Link
Gupta R., Desai S. et al. - "Galaxy morphology classification using neural ordinary differential equations". Astron and Comput 38, 2022. Link
Tang H., Scaife A.M.M. et al. - "Radio Galaxy Zoo: giant radio galaxy classification using multidomain deep learning". Monthly Not. of the Royal Astron. Soc. 510(3), 2022. Link
--2021--
Masters K.L., Lintott C. et al. - "Galaxy Zoo 3D: Crowdsourcing the identification of internal structure and foreground stars in MaNGA bundles". Bulletin of the AAS 53(1), 2021. Link
Metha V., Scarlata C. et al. - "Investigating Clumpy Galaxies in SDSS Stripe82 using Galaxy Zoo". The Astroph J 912 (1), 2021. Link
Wamsley M., Lintott C. et al. - "Galaxy Zoo DECaLS: Detailed visual morphology measurements from volunteers and deep learning for 314 000 galaxies". Monthly Not. of the Royal Astron. Soc. 509(3), 2021. Link
Geron T., Smethurst R.J. et al. - "Galaxy zoo: stronger bars facilitate quenching in star-forming galaxies". Monthly Not. of the Royal Astron. Soc. 507(3), 2021. Link
Lingard T., Masters K.L. et al. - "Galaxy zoo builder: Morphological dependence of spiral galaxy pitch angle". Monthly Not. of the Royal Astron. Soc. 504(3), 2021. Link
Sarkar S., Pandey B. et al. - "Do galactic bars depend on environment?: an information theoretic analysis of Galaxy Zoo 2". Monthly Not. of the Royal Astron. Soc. 501 (1), 2021. Link
Shamshi S.J., Masters K.L. et al. - "Tracing Star Formation in Spirals with Galaxy Zoo: 3D". Bulletin of the AAS 53(1), 2021.
https://ui.adsabs.harvard.edu/abs/2021AAS...23735107S/abstract
Smith D.M., Holwerda B.W. - "Transformations of Galaxies in the Green Valley According to the Galaxy Zoo Voting". Bulletin of the AAS 53(1), 2021. Link
--2020--
Cheng T-Y., Conselice T.J et al. - "Optimising Automatic Morphological Classification of Galaxies with Machine Learning and Deep Learning using Dark Energy Survey Imaging". Monthly Not. of the Royal Astron. Soc. 493 (3), 2020. Link
Lingard T.K., Masters K.L. et al. - "Galaxy Zoo Builder: Four-component Photometric Decomposition of Spiral Galaxies Guided by Citizen Science". The Astroph Jour 900(2), 2020. Link
Kosiba M., Lieu M. et al. - "Multiwave length classification of X-ray selected galaxy cluster candidates using convolutional neural networks". Monthly Not. of the Royal Astron. Soc. 496(4), 2020. Link
Fulton M., Smith K.W. et al. - "Supernova Hunters Discovery of 24 Optical Transients with Pan-STARRS". Transient Name Server AstroNote 255, 2020. Link
Tang H., Scaife A.M.M. et al. - "Radio Galaxy Zoo: new giant radio galaxies in the RGZ DR1 catalogue". Monthly Not. of the Royal Astron. Soc. 499(1), 2020. Link
Wainer T., Johnson L. et al. - "Search for Local Group Clusters: M33 Survey Data". Americ Astron Soc Meeting #235, 2020. Link
Variawa M.Z., Woolway M. et al. - "A rules-based and Transfer Learning approach for deriving the Hubble type of a galaxy from the Galaxy Zoo data". 23th Intern Conf on Inform Fusion, 2020. Link
Variawa M.Z., Woolway M. et al. - "Comparing Generalisation Using Crowd-Sourced vs Expert Labels for Galaxies Classification". 7th Int Conf on Soft Comp & Machine Intellig (ISCMI), 2020. Link
Thiemann H. - "Red Giant Binary Stars. A new discovery?". The Open University, 2020. Link
Thiemann H., Norton A.J. - "Investigation of the rotation-activity relation for a sample of SuperWASP and ASAS-SN field stars". Publications of the Astronom Soc of Australia (PASA), 2020. Link
Martin G., Kaviraj S. et al. - "Galaxy morphological classification in deep-wide surveys via unsupervised machine learning". Monthly Not. of the Royal Astron. Soc. 491(1), 2020. Link
Barchi P.H., Sautter R.A. et al. - "Machine and Deep Learning applied to galaxy morphology - A comparative study". Astronomy and Computer 30, 2020. Link
Wamsley M., Lintott C.J. et al. - "Galaxy Zoo: Probabilistic Morphology through Bayesian CNNs and Active Learning". Monthly Not. of the Royal Astron. Soc. 491(2), 2020. Link
--2019--
Easton N., Miller A. et al. - "Variable star classification with crowd sourcing". AAS Meeting 233, 2019. Link
Masters K, Galaxy Zoo Team - "Twelve Years of Galaxy Zoo". Proceedings of Galac Dinam in Era of Large Survey 353, 2019. Link
Raddick M.J., Wallace C.S. et al. - "Galaxy zoo: Science content knowledge of citizen scientists". Public Understandig of Science 28(6), 2019. Link
Masters K. - "Galaxy Morphology from Galaxy Zoo". AAS Meeting 233, 2019. Link
Galvin T.J., Norris R.P. et al. - "Radio Galaxy Zoo: Unsupervised Clustering of Convolutionally Auto-encoded Radio-astronomical Images". Public of Astron Society of Pacific 131(1004), 2019. Link
Ralph N.O., Norris R.P. et al. - "Radio Galaxy Zoo: Knowledge Transfer Using Rotationally Invariant Self-Organising Maps". Public of Astron Society of Pacific 131(1004), 2019. Link
Simmons B., Lintott C.J. et al. - "The growth of bars from 0.25 < z < 1: analysis of galactic bar lengths and strengths with Galaxy Zoo: Bar Lengths". AAS Meeting 233, 2019. Link
Davis T.A., Young L.M. - "Gas accretion as fuel for residual star formation in Galaxy Zoo elliptical galaxies". Monthly Not. of the Royal Astron. Soc. 489(1), 2019. Link
Master K.L., Lintott C.J. et al. - "Galaxy Zoo: unwinding the winding problem – observations of spiral bulge prominence and arm pitch angles suggest local spiral galaxies are winding". Monthly Not. of the Royal Astron. Soc. 487(2), 2019. Link
Garon A.F., Rudnick L. et al. - "Radio Galaxy Zoo: The Distortion of Radio Galaxies by Galaxy Clusters". The Astron Jour 157(3), 2019. Link
Jimenez M., Triguero I. et al. - "A Preliminary Approach for the Exploitation of Citizen Science Data for Fast and Robust Fuzzy k-Nearest Neighbour Classification". IEEE Intern Confer on Fuzzy Logic, 2019. Link
Holwerda B.W., Lintott C. et al. - "The Frequency of Dust Lanes in Edge-on Spiral Galaxies Identified by Galaxy Zoo in KiDS Imaging of GAMA Targets". The Astron Jour 158(3), 2019. Link
Rasheed M.A., Mohammad K.K. - "Morphological Distribution of Galaxies in Some Nearby Clusters". Open Astronomy 28(1), 2019. Link
Zhu X-P, Dai J-M. et al. - "Galaxy morphology classification with deep convolutional neural networks".Astroph and Space Science 364(55), 2019. Link
Krolewki A., Ho S. et al. - "Alignment between filaments and galaxy spins from the MaNGA integral-field survey". The Astrophy J. 876(1), 2019. Link
Walmsley M., Smith L. et al. - "Galaxy Zoo: Probabilistic Morphology through Bayesian CNNs and Active Learning". Monthly Not. of the Royal Astron. Soc. 491(2), 2019. Link
Dickinson H., Fortson L. et al. - "Modeling with the Crowd: Optimizing the Human-Machine Partnership with Zooniverse". Proc of Int Aston Union, 2019. Link
Lintott C., Walmsley M. - "Robots and Citizens: A Galaxy Zoo view of Machine Learning". AAS Meeting 233, 2019. Link
Garon A.F., Rudnick L. et al. - "Radio Galaxy Zoo: The Distortion of Radio Galaxies by Galaxy Clusters". The Astron J. 157(3), 2019. Link
Simmons B., Masters K. et al. - "The growth of bars from 0.25 < z < 1: analysis of galactic bar lengths and strengths with Galaxy Zoo: Bar Lengths". AAS Meeting 233, 2019. Link
Masters K. - "Galaxy Morphology from Galaxy Zoo". AAS Meeting 233, 2019. Link
--2018--
Chong K., Yang A. - "Photometric Redshift Analysis using Supervised Learning Algorithms and Deep Learning". ISMD 2018. Link
Norton A.J. - "A Zooniverse Project to Classify Periodic VariableStars from SuperWASP". AAS 2(4), 2018. Link
Cao Y., Chen L. - "Convolutional Neural Networks for Galaxy Zoo Challenge of Morphological Class Probablity Regression". 2018. Link
Katebi R., Zhou Y. et al. - "Galaxy morphology prediction using capsule networks". Monthly Not. of the Royal Astron. Soc., 2018. Link
Hart R.E., Bamford S.P. et al. - "Galaxy Zoo: constraining the origin of spiral arms". Monthly Not. of the Royal Astron. Soc. 478(1), 2018. Link
Wu C., Wong I. et al. - "Radio Galaxy Zoo: ClaRAN - A Deep Learning Classifier for Radio Morphologies". Monthly Not. of the Royal Astron. Soc. 2018. Link
Lukic V., Bruggen M. et al. - "Radio Galaxy Zoo: compact and extended radio source classification with deep learning". Monthly Not. of the Royal Astron. Soc. 476(1), 2018. Link
Jesse C.S., Lintott C.J. et al. - "Galaxy Zoo: Infrared and Optical Morphology". AAS Meeting 231, 2018. Link
Dickinson C., Lintott C.J. et al. - "Galaxy Zoo: Comparing the visual morphology of synthetic galaxies from the Illustris simulation with those in the real Universe". AAS Meeting 231, 2018. Link
Cardamone C., Cappelluti N. et al. - "Environments of z~0.2 Star Forming Galaxies: Building on the Citizen Science Discovery of the Green Peas". AAS Meeting 231, 2018. Link
Norton A. - "A Zooniverse project to classify periodic variable stars from SuperWASP". British Astronom Assoc Variable Stars Workshop 177, 2018. Link
Dickinson H., Scarlata C. et al. - "Galaxy Nurseries: Crowdsourced Analysis of Slitless Spectroscopic Data". Research Notes of AAS 2(3), 2018. Link
Crowe C., Lundgren B. et al. - "Crowdsourcing Broad Absorption Line Properties and Other Features of Quasar Outflow Using Zooniverse Citizen Science Project Platform". AAS Meeting 231, 2018. Link
Fortson L., Darryl W. et al. - "Zooniverse: Combining Human and Machine Classifiers for the Big Survey Era". AAS Bulletin, 2018. Link
Dickinson H., Fortson L. et al. - "Galaxy Zoo: Morphological classification of galaxy images from the Illustris Simulation". The Astrophysical Journal 853(194), 2018. Link
Kruk S.J., Lintott C.J. et al. - "Galaxy Zoo: Secular evolution of barred galaxies from structural decomposition of multi-band images". Monthly Not. of the Royal Astron. Soc. 473(4), 2018. Link
--2017--
Hart R.E., Bamford S.P. et al. - "VizieR Online Data Catalog: Galaxy Zoo 2: new classification". Monthly Not. of the Royal Astron. Soc. 461, 2017. Link
Buta R.J. - "Galactic rings revisited – I. CVRHS classifications of 3962 ringed galaxies from the Galaxy Zoo 2 Database". Monthly Not. of the Royal Astron. Soc. 471(4), 2017. Link
Contigiani O., De Gasperin F. et al. - "Radio Galaxy Zoo: Cosmological Alignment of Radio Sources". Monthly Not. of the Royal Astron. Soc. 472 (1), 2017. Link
Hart R.E., Bamford S.P. et al. - "Galaxy Zoo and Sparcfire: constraints on spiral arm formation mechanisms from spiral arm number and pitch angles". Monthly Not. of the Royal Astron. Soc. 472(2), 2017. Link
Smethurst R.J., Lintott C.J. et al. - "Galaxy Zoo: the interplay of quenching mechanisms in the group environment". Monthly Not. of the Royal Astron. Soc. 469(3), 2017. Link
Zevin M., Coughlin S. et al. - "Gravity Spy: Integrating Advanced LIGO Detector Characterization, Machine Learning, and Citizen Science". Class Quantum Grav 34, 2017. Link
Willet K.W., Galloway M.A. et al. - "Galaxy Zoo: Morphological Classification for 120,000 Galaxies in HST Legacy Imaging". Monthly Not. of the Royal Astron. Soc. 464(4), 2017. Link
Kapinska A.D., Terentev I. et al. - "Radio Galaxy Zoo: A search for hybrid morphology radio galaxies". The Astronomical Journal 154(6), 2017. Link
Weigel A.K., Schawinski K. et al. - "Galaxy Zoo: Major Galaxy Mergers Are Not a Significant Quenching Pathway". The Astrophysical Journal 845(2), 2017. Link
Kruk S.J., Lintott C.J. et al. - "Galaxy Zoo: finding offset discs and bars in SDSS galaxies". Monthly Not. of the Royal Astron. Soc. 469(3), 2017. Link
--2016--
Kunchner M.J., Silverberg S.M. et al. - "Disk Detective: Discovery of New Circumstellar Disk Candidates through Citizen Science". Astrophy Jour 830(2), 2016. Link
Honghui S. - "Classification of Galaxies using Convolutional Neural Networks (CNN)". Master of Science in Electrical and Computer Engineering, 2016. Link
Straub M.C.P. - "Giving Citizen Scientists a Chance: A Study of Volunteer-led Scientific Discovery". Citiz Science Theory and Practice 1(1), 2016. Link
Simmons D.B., Lintott C. et al. - "Galaxy Zoo: Quantitative Visual Morphological Classifications for 48,000 galaxies from CANDELS". Monthly Not. of the Royal Astron. Soc., 2016. Link
Banfield J.K., Andernach H., Kapinska A.D. et al. - "Radio Galaxy Zoo: discovery of a poor cluster through a giant wide-angle tail radio galaxy". Monthly Not. of the Royal Astron. Soc. 460, 2016. Link
Holincheck A.J., "Galaxy Zoo: Mergers - Dynamical Models of Interacting Galaxies". Monthly Not. of the Royal Astron. Soc. 2016. Link
Master K., Younh Ho e., Cox J. et al. - "Science Learning via Participation in Online Citizen Science". J of Science Commun, 2016. Link
Cox J., Younh Ho e. et al. - "How is success defined and measured in online citizen science? A case study of Zooniverse projects". Comput in Science and Engineering 17(4), 2016. Link
Bugiolacchi R., Bamfort S., Tar P. et al - "The Moon Zoo citizen science project: Preliminary results for the Apollo 17 landing site". Icarus 01.021, 2016. Link
--2015--
More A., Verma A., Marshall P.J. et al. - "Space Warps: II. New Gravitational Lens Candidates from the CFHTLS Discovered through Citizen Science". Monthly Not. of the Royal Astron. Soc. 455(2), 2015. Link
Geach J.E., More A. - "The Red Radio Ring: a gravitationally lensed hyperluminous infrared radio galaxy at z=2.553 discovered through citizen science". Monthly Not. of the Royal Astron. Soc. 452(1), 2015. Link
Kung R., Saha P. et al. - "Gravitational Lens Modelling in a Citizen Science Context". Monthly Not. of the Royal Astron. Soc. 447, 2015. Link
Campbell A., Cartier R. et al. - "PESSTO spectroscopic classification of optical transients". The Astronomer's Telegram 7261, 2015. Link
Banfield J.K., Wong O.I.. Willett K.W. et al. - "Radio Galaxy Zoo: host galaxies and radio morphologies derived from visual inspection". Monthly Not. of the Royal Astron. Soc. 453(3), 2015. Link
Dieleman S., Willett K.W., Dambre J. - "Rotation-invariant convolutional neural networks for galaxy morphology prediction". Monthly Not. of the Royal Astron. Soc. 450(2), 2015. Link
Willett K.W., Schawinski K., Simmons B.D. et al. - "Galaxy Zoo: the dependence of the star formation-stellar mass relation on spiral disk morphology". Monthly Not. of the Royal Astron. Soc. 499(1), 2015. Link
Smethurst R.J., Lintott C.J., Simmons B.D. et al. - "Galaxy Zoo: Evidence for Diverse Star Formation Histories through the Green Valley". Monthly Not. of the Royal Astron. Soc. 450(1), 2015. Link
Galloway M.A., Willet K.W., Fortson L.F. et al. - "Galaxy Zoo: the effect of bar-driven fueling on the presence of an active galactic nucleus in disc galaxies". Monthly Not. of the Royal Astron. Soc. 448(4), 2015. Link
Clifton Johnson L., Seth A.C., Dalcanton J.J. et al. - "Phat stellar cluster survey II. Andromeda project cluster catalog". The Astrophys Jour 802(2), 2015. Link
--2014--
Keel W.C., Manning A.M., Holwerda B.W. et al. - "Galaxy Zoo: The Ultraviolet Attenuation Law in Backlit Spiral Galaxies". The Astronomical Jour. 147(2), 2014. Link
Simmons B.D., Melvin T., Lintott C. et al. - "Galaxy Zoo: CANDELS Barred Disks and Bar Fractions". Monthly Not. of the Royal Astron. Soc. 445(4), 2014. Link
Marshall P.J., Lintott C. et al. - "Ideas for Citizen Science in Astronomy".Annual Review of Astron and Astroph 53, 2014. Link
Cheung E., Trump J.R., Athanassoula E. et al. - "Galaxy Zoo: Are Bars Responsible for the Feeding of Active Galactic Nuclei at 0.2< z <1.0?". Monthly Not. of the Royal Astron. Soc. 447(1), 2014. Link
Cox J., Younh Ho e. et al. - "Playing with science: Gamised aspects of gamification found on the online citizen science project – Zooniverse". GameON Conference, 2014. Link
Ponciano L., Brasileiro F. - "Finding Volunteers’ Engagement Profiles in Human Computation for Citizen Science Projects". Human Computation 1(2), 2014. Link
Schawinski K., Urry C.M., Simmons B., Fortson L. et al. - "The Green Valley is a Red Herring: Galaxy Zoo reveals two evolutionary pathways towards quenching of star formation in early- and late-type galaxies". Monthly Not. of the Royal Astron. Soc., 2014. Link
Melvin T., Masters K.L., Lintott C. et al. - "Galaxy Zoo: An independent look at the evolution of the bar fraction over the last eight billion years from HST-COSMOS". Monthly Not. of the Royal Astron. Soc. 438(4), 2014. Link
Kuminski E., George J. et al. - "Combining human and machine learning for morphological analysis of galaxy images". Astronomical Society of the Pacific 126(944), 2014. Link
Madison M.J. - "Commons at the Intersection of Peer Production, Citizen Science, and Big Data: Galaxy Zoo". Governing Knowledge Commons Oxford University Press, 2014. Link
--2013--
Cheung E., Athanassoula E., Masters K.L. et al. - "Galaxy Zoo: Observing Secular Evolution Through Bars". Astrophys Jour. 779(2), 2013. Link
Willett K.W., Lintott C.J., Bamford S.P. et al. - "Galaxy Zoo 2: detailed morphological classifications for 304,122 galaxies from the Sloan Digital Sky Survey". Monthly Not. of the Royal Astron. Soc. 435(4), 2013. Link
Rodriguez S., Padilla N.D. - "The Intrinsic Shape of Galaxies in SDSS/Galaxy Zoo". Monthly Not. of the Royal Astron. Soc. 434(3), 2013. Link
Tojero R., Masters K.L., Richards J., Percival W.J et al. - "The different star-formation histories of blue and red spiral and elliptical galaxies". Monthly Not. of the Royal Astron. Soc. 432(1), 2013. Link
Lintott C.J., Masters K.L., Brooke S. et al. - "Morphology in the Era of Large Surveys". Astronomy&Geophysics 54(5), 2013. Link
Masters K.L. - "A Zoo of Galaxies". Highlights of Astronomy 16, 2013. Link
Raddick M.J., Bracey G., Gay P.L., Lintott C.J. et al. - "Galaxy Zoo: Motivations of Citizen Scientists". Astronomy Education Review 12, 2013. Link
Keel W.C., Manning A., Holwerda B.W. et al. - "Galaxy Zoo: A Catalog of Overlapping Galaxy Pairs for Dust Studies". Publ. Astron. Soc. Pac. 125, 2013. Link
--2012--
Levitan D., Kupfer T., Groot P.J. et al. - "Five new outbursting AM CVn systems discovered by the Palomar Transient Factory". Monthly Not. of the Royal Astron. Soc. 430(2), 2012. Link
Casteels K.R.V, Bamford S.P., Skibba R.A et al. - "Galaxy Zoo: quantifying morphological indicators of galaxy interaction". Monthly Not. of the Royal Astron. Soc. 429(2), 2012. Link
Maguire K., Sullivan M. et al. - "Hubble Space Telescope studies of low-redshift Type Ia supernovae: evolution with redshift and ultraviolet spectral trends". Monthly Not. of the Royal Astron. Soc. 426(3), 2012. Link
Masters K.L., Nichol R.C., Haynes M.P et al. - "Galaxy Zoo and ALFALFA: atomic gas and the regulation of star formation in barred disc galaxies". Monthly Not. of the Royal Astron. Soc. 424(3), 2012. Link
Skibba R.A., Masters K.L., Nichol R.C., et al. - "Galaxy Zoo: the environmental dependence of bars and bulges in disc galaxies". Monthly Not. of the Royal Astron. Soc. 423(49), 2012. Link
Kaviraj S., Ting Y-S., Bureau M. et al. - "Galaxy Zoo: Dust and molecular gas in early-type galaxies with prominent dust lanes", Monthly Not. of the Royal Astron Soc 423(49), 2012. Link
Shabala S.S., Ting Y-S., Kaviraj S. et al. - "Galaxy Zoo: Dust lane early-type galaxies are tracers of recent, gas-rich minor mergers", Monthly Not. of the Royal Astron. Soc. 423(49), 2012. Link
Hoyle B., Masters K.L., Nichol R.C et al. - "The fraction of early-type galaxies in low-redshift groups and clusters of galaxies". Monthly Not. of the Royal Astron. Soc. 423(4), 2012. Link
Finkelman I., Funes J.G., Brosch N. - "Polar ring galaxies in the Galaxy Zoo". Monthly Not. of the Royal Astron. Soc. 422(3), 2012. Link
Carpineti A., Kaviraj S., Darg D., Lintott C.J. et al. - "Spheroidal post-mergers in the local Universe". Monthly Not. of the Royal Astron. Soc. 420(3), 2012. Link
Wong O.I., Schawinski K., Kaviraj S. et al. - "Galaxy Zoo: building the low-mass end of the red sequence with local post-starburst galaxies". Monthly Not. of the Royal Astron. Soc. 420(2), 2012. Link
Keel W.C., Chojnowski S.D., Bennert - "The Galaxy Zoo survey for giant AGN-ionized clouds: past and present black hole accretion events". Monthly Not. of the Royal Astron. Soc. 420(1), 2012. Link
Simpson E., Roberts S., Psorakis I. et al. - "Dynamic Bayesian Combination of Multiple Imperfect Classifiers". Decision Making and Imperfection Book, 2012. Link
Teng S.H., Schawinski K., Urry C.M., Darg D.W. et al. - "Chandra Observations of Galaxy Zoo Mergers: Frequency of Binary Active Nuclei in Massive Mergers". Astrophys Jour. 753(2), 2012. Link
--2011--
Clery D. - "Galaxy Zoo Volunteers Share Pain and Glory of Research". Science 333(6039), 2011. Link
Kaviraj S., Darg D., Lintott C., et al. - "Tidal dwarf galaxies in the nearby Universe". Monthly Not. of the Royal Astron. Soc. 419(1), 2011. Link
Maguire K., Sullivan M. et al. - "PTF10ops - a subluminous, normal-width light curve Type Ia supernova in the middle of nowhere". Monthly Not. of the Royal Astron. Soc. 418(2), 2011. Link
Way M.J. - "Galaxy Zoo Morphology and Photometric Redshifts in the Sloan Digital Sky Survey". The Astrophys. Jour. Lett. 734(1), 2011. Link
Hoyle B., Masters K.L., Nichol R.C et al., - "Galaxy Zoo : Bar Lengths in Nearby Disk Galaxies", Monthly Not. of the Royal Astron. Soc. 415, 2011. Link
Masters K.L., Nichol R.C, Hoyle B. et al. - "Galaxy Zoo: bars in disk galaxies". Monthly Not. of the Royal Astron. Soc. 411(3), 2011. Link
Lintott C., Schawinski K., Bamford S. et al. - "Galaxy Zoo 1 : Data Release of Morphological Classifications for nearly 900,000 galaxies", Monthly Not. of the Royal Astron. Soc. 410(1), 2011. Link
Robbins S.J., Chapman C.R., Gay P.L. - "Moon Zoo: Lessons learned from the first year of citizen scientists identifying Lunar Craters". 2nd Planetary Crater Consortium, 2011. Link
Gay P.L., Brown S., Huang D. et al. - "Moon Zoo: Making the public part of a crater survey algorithm". EPSC-DPS Joint Meeting, 2011. Link
Joy K., Cramford I., Grindod P. et al. - "Moon Zoo: A Citizen Science in Lunar Exploration." Astronomy & Geophysics 52(2), 2011.
Link
Smith A. M, Linn S., Sullivan M. et al., 2011, "Galaxy Zoo Supernovae", Monthly Not. of the Royal Astron. Soc., 412(1309), 2011. Link
--2010--
Darg D. W., Kaviraj S., Lintott C.J. et al., "Galaxy Zoo: Multi-Mergers and the Millennium Simulation", Monthly Not. of the Royal Astron. Soc. 416(1745), 2010. Link
Banerji M., Lahav O., Lintott C.J. et al. - "Galaxy Zoo: Reproducing galaxy morphologies via machine learning". Monthly Not. of the Royal Astron. Soc. 406(1), 2010. Link
Masters K.L., Mosleh M., Romer A.K. et al. - "Galaxy Zoo: passive red spirals", Monthly Not. of the Royal Astron. Soc. 405(2), 2010. Link
Masters K.L., Nichol R., Bamford S. et al. - "Galaxy Zoo: dust in spiral galaxies", Monthly Not. of the Royal Astron. Soc. 404(2), 2010. Link
Schawinski K., Evans D.A., Virani S. et al. - "The Sudden Death of the Nearest Quasar", The Astrophys. Jour. Lett. 724(1), 2010. Link
Schawinski K., Urry C.M., Virani S. et al. - "Galaxy Zoo: The Fundamentally Different Co-Evolution of Supermassive Black Holes and Their Early- and Late-Type Host Galaxies". The Astrophys. Jour. Lett. 711(1), 2010. Link
Jimenez R., Slosar A., Verde L. et al. - "Galaxy Zoo: a correlation between the coherence of galaxy spin chirality and star formation efficiency". Monthly Not. of the Royal Astron. Soc. 404(2), 2010. Link
Raddick J.M., Bracey G., Gay P.L. et al. - "Galaxy Zoo: Exploring the Motivations of Citizen Science Volunteers". Astronomy Education Review 9(1), 2010. Link
Darg D. W., Kaviraj S., Lintott C.J. et al. - "Galaxy Zoo: The properties of merging galaxies in the nearby Universe - local environments, colours, masses, star-formation rates and AGN activity". Monthly Not. of the Royal Astron. Soc. 401(3), 2010. Link
--2009--
Darg D., Kaviraj S., Lintott C.J. et al. - "Galaxy Zoo: the fraction of merging galaxies in the SDSS and their morphologies". Monthly Not. of the Royal Astron. Soc. 401(2), 2009. Link
Cardamone C., Schawinski K., Sarzi M. et al. - "Galaxy Zoo Green Peas: Discovery of A Class of Compact Extremely Star-Forming Galaxies". Monthly Not. of the Royal Astron. Soc., 399(2), 2009. Link
Skibba R.A., et al. - "Galaxy Zoo: disentangling the environmental dependence of morphology and colour". Monthly Not. of the Royal Astron. Soc., 399(2), 2009. Link
Lintott C.J., Schawinski K., Keel W. et al. - "Galaxy Zoo: 'Hanny's Voorwerp', a quasar light echo?". Monthly Not. of the Royal Astron. Soc. 399(1), 2009. Link
Schawinski K., Lintott C., Thomas D. et al. - "Galaxy Zoo : A sample of blue early-type galaxies at low redshift". Monthly Not. of the Royal Astron. Soc. 396(2), 2009. Link
Bamford S.P., Nichol R.C., Baldry I.K. et al. - "Galaxy Zoo: the dependence of morphology and colour on environment". Monthly Not. of the Royal Astron. Soc. 393(4), 2009. Link
Slosar A., Land K., Bamfort S. et al. - "Galaxy Zoo: Chiral correlation function of galaxy spins". Monthly Not. of the Royal Astron. Soc. 392(3), 2009. Link
--2008--
Lintott C.J., Schawinski K., Slosar A. et al. - "Galaxy Zoo: Morphologies derived from visual inspection of galaxies from the Sloan Digital Sky Survey". Monthly Not. of the Royal Astron. Soc. 389(3), 2008. Link
Land K., Slosar A., Lintott C.J. et al. - "Galaxy Zoo: The large-scale spin statistics of spiral galaxies in the Sloan Digital Sky Survey". Monthly Not. of the Royal Astron. Soc. 388(4), 2008. Link
Hodgkinson I.A., Mousavi S. et al. - "New development: Citizen science—discovering (new) solutions to wicked problems". Public Money&Management 42(2), 2021. Link
Dicker S. - "Technoscientific Citizenship in Citizen Science. Assembling Crowds for Biomedical Research". TechnoScienceSociety 30, 2020. Link
Smittenaar P., Walker A.K. et al. - "Harnessing citizen science through mobile phone technology to screen for immunohistochemical biomarkers in bladder cancer". British J of cancer 119, 2018. Link
Rotaru D.C., Baltasar F.M. et al. - "Developing gamified interactive content for medicaltraining in cytopathology". 1st Worksh on gamification and games for science, 2017. Link
Candido do Reis F.J., Lynn S. et al. - "Crowdsourcing the General Public for Large Scale Molecular Pathology Studies in Cancer". Ebiomedicine 2, 2015. Link
Pharoah P. - "Contributing to Cancer research with Cell Slider". American Association for the Advancement of Science, 2014. Link
James L.A., Scott C.J. et al. - "Sensitivity of Model Estimates of CME Propagation and Arrival Time to Inner Boundary Conditions". Space Weather 21(4), 2022. Link
Jones S.R., Scott C.J. et al. - "The Visual Complexity of Coronal Mass Ejections Follows the Solar Cycle". Space Weather 18(10), 2020. Link
Scott C., Bernard L. et al. - "Researching solar storms with citizen scientists: engaging with four thousand volunteer research assistants". Open Research Case Study, University of Reading 2019. Link
Bernard L., Scott C. et al. - "Differences between the CME fronts tracked by an expert, an automated algorithm, and the Solar Stormwatch project". Space Wheater 13(10), 2015. Link
Tucker-Hood K., Scott C. et al. - "Validation of a priori CME arrival predictions made using real-time heliospheric imager observations". Space Wheater 13(1), 2015. Link
Bernard L., Scott C. et al. - "The Solar Stormwatch CME catalogue: Results from the first space weather citizen science project". Space Wheater 12(12), 2014. Link
Davis C.J., Davies J.A. et al. - "The distribution of interplanetary dust between 0.96 and 1.04 AU as inferred from impacts on the STEREO spacecraft observed by the Heliospheric Imagers". Monthly Not. of the Royal Astron. Soc. 420(2), 2012. Link
Savani N.P., Davies J.A., Davis C.J. et al. - "Observational Tracking of the 2D Structure of Coronal Mass Ejections Between the Sun and 1 AU". Solar Physics 279(2), 2012. Link
Whisnant A.S., Povic M.S. et al. - "The Milky Way Project MOBStIRS: Parameterizing Infrared Stellar-wind Bow Shock Morphologies with Citizen Science". The Astronom J. 169(6), 2025. Link
Devine K., Kerton C.R. et al. - "The Milky Way Project: Bridging Intermediate- and High-mass Star Formation with the MIRION Catalog of Yellowballs". The Astrophys J. 998(1), 2025. Link
Devine K., Wolf-Chase G. et al. - "Leveraging a Milky Way Project Discovery to Bridge Our Understanding of Low- and High-Mass Star Formation: Student Involvement via The PERYSCOPE Project". Bulletin of the American Astron Society 56(7), 2024. Link
Wisnant A., Povich M.S. - "The Milky Way Project MOBStIRS: Parameterizing Infrared Bow Shock Morphologies with Citizen Science". Bulletin of the American Astr Society 55(2), 2023. Link
Simcoe R. - "NEOWISE As A Transient Discovery Machine: Revealing The Enshrouded Births, Deaths And Afterlives Of Stars Through Cosmic Time". NASA Astrophysics Data Analysis, 2023. Link
Wisnant A., Povich M.S. et al. - "The Milky Way Project: MOBStIRS (Mass-loss rates of OB Stars from IR bow Shocks)". Pomona Calif State University Undergrad Project, 2022. Link
Thevenot M., Cornen C. et al. - "Galaxies in the Zone of Avoidance with the Spitzer Space Telescope". Research Notes of AAS 4(9), 2020. Link
Wu Y, Abbott K. - "Aperture Photometry and Distance Determination of Star-Forming Regions in the Milky Way". 5th Annual Creat Activ&Research Symp, 2020. Link
Jayasinghe T., Dixon D. et al. - "The Milky Way Project second data release: bubbles and bow shocks". Monthly Not. of the Royal Astron. Soc. 488(1), 2019. Link
Wolf-Chase G.A., Kerton C.R. et al. - "The Milky Way Project: Probing Star Formation with a New Yellowball Catalog". Bull of the Amer Astr Society 51(4), 2019. Link
Dixon D., Jayasinghe T. et al. - "The Milky Way Project: A Citizen Science Catalog of Infrared Bow Shock Nebulae". AAS Meeting 229, 2017. Link
Kendrew S., Beuther H. et al. - "The Milky Way Project and ATLASGAL: The distribution and physical properties of cold clumps near infrared bubbles". Astrophys J, 2016. Link
Kerton C.R., Wolf-Chase G., Lintott C.J. et al. - "The Milky Way Project: What are Yellowballs?". Astrophys Jour. 799(153), 2015. Link
Beaumont C., Goodman A. et al. - "The Milky Way Project: Leveraging Citizen Science and Machine Learning to Detect Interstellar Bubbles". Astrophys J, 2014. Link
Kendrew S., Simpson R.J., Bressert E. et al. - "The Milky Way Project: A Statistical Study of Massive Star Formation Associated with Infrared Bubbles". Astrophys J. 775(1), 2012. Link
Simpson R.J., Povich M.S., Kendrew S. et al. - "The Milky Way Project First Data Release: a bubblier Galactic disc". Monthly Not. of the Royal Astron. Soc. 424(4), 2012. Link
Luterbacher J., Allan R. et al. - "The Importance and Scientific Value of Long Weather and Climate Records; Examples of Historical Marine Data Efforts across the Globe". Climate 12(3), 2024. Link
Van Hyning V., Bibeault B. et al. - "Shifting Roles of Citizen Scientists Accelerates High-Quality Data Collection for Climate Change Research". ASIS&T Proceedings 60(1), 2023. Link
Aucott P., Southall H. et al. - "Citizen science through old maps: Volunteer motivations in the GB1900 gazetteer-building project". Historical Methods 52(3), 2019. Link
Eveleigh A., Jennett C. et al. - "Designing for Dabblers and Deterring Drop-Outs in Citizen Science". CHI 2014. Link
Jennette C. - "I want to be a Captain! I want to be a Captain!": Gamification in the Old Weather citizen science project". Gamification, 2013. Link
Jennette C. et al. - "Creativity in citizen cyberscience: All for one and one for all". ACM WebSci, 2013. Link
Loetzer L., Schneider D., Jettett C. et al. - "Learning by volunteer computing, thinking and gaming: What and how are volunteers learning by participating in Virtual Citizen Science". 7th ESREA European Conference, 2013. Link
Progetto "Planet Hunter/Exoplanets/Planet 9"
Rothermich A., Faherty J.K. et al. - "89 New Ultracool Dwarf Comoving Companions Identified with the Backyard Worlds: Planet 9 Citizen Science Project". The Astron J 167(6), 2024. Link
Killestein T.L., Kelsey L. et al. - "Kilonova Seekers: the GOTO project for real-time citizen science in time-domain astrophysics". Monthly Not. of the Royal Astron. Soc. 533(2), 2024. Link
O'Brien S., Gill S. et al. - "Planet Hunters NGTS: New Planet Candidates from a Citizen Science Search of the Next Generation Transit Survey Public Data". The Astron J 167(5), 2024. Link
Peluso D., Esposito T.M. et al. - "The Unistellar Exoplanet Campaign: Citizen Science Results and Inherent Education Opportunities". PASP 135, 2023. Link
Jalowiczor P.A., Casewell S. et al. - "Identification of a Low-mass Companion to the White Dwarf SDSS J131730.84+483332.7". Res. Notes AAS 5(76), 2021. Link
Faherty J.K., Gagnè J. et al. - "A Wide Planetary Mass Companion Discovered through the Citizen Science Project Backyard Worlds: Planet 9". Astrophys J 923(48), 2021. Link
Eisner N.L., Barragan O. et al. - "Planet Hunters TESS III: two transiting planets around the bright G dwarf HD 152843".
Monthly Not. of the Royal Astron. Soc. 505(2), 2021. Link
Cacciapuoti L., Kostov V.B. et al. - "The TESS Triple-9 Catalog: 999 uniformly vetted candidate exoplanets". Monthly Not. of the Royal Astron. Soc. 513(1), 2021. Link
Eisner N.L., Barragan O. et al. - "Planet Hunters TESS II: findings from the first two years of TESS". Monthly Not. of the Royal Astron. Soc. 501(4), 2021. Link
Meisner A.M., Faherty J.K. et al. - "Spitzer Follow-up of Extremely Cold Brown Dwarfs Discovered by the Backyard Worlds: Planet 9 Citizen Science Project". The Astrophys J 899(2), 2020. Link
Eisner N.L., Barragan O. et al. - "Planet Hunters TESS I: TOI 813, a subgiant hosting a transiting Saturn-sized planet on an 84-day orbit". Monthly Not. of the Royal Astron. Soc. 494(1), 2020. Link
Faherty J.K., Goodman S. et al. - "WISE 2150-7520AB: A Very Low-mass, Wide Comoving Brown Dwarf System Discovered through the Citizen Science Project Backyard Worlds: Planet 9". The Astrophys. J. 889(2), 2020. Link
Caselden D., Meisner A.M. et al. - "The Backyard Worlds: Planet 9 Citizen Science Project -- Status and Discoveries". AAS Meeting 233, 2019. Link
Zink J.K., Lintott C.J. et al. - "Catalog of New K2 Exoplanet Candidates from Citizen Scientists". Res. Notes AAS 3(43), 2019. Link
Faherty J.K., Kuchner M. et al. - "The Backyard Worlds: Planet 9 Citizen Science Project". AAS Meeting 231, 2018. Link
Christiansen J.L., Crossfield J.M. et al. - "The K2-138 System: A Near-Resonant Chain of Five Sub-Neptune Planets Discovered by Citizen Scientists". The Astronomical Journal 155(2), 2018. Link
Schmitt J.R., Tokovinin A. et al. - "Planet Hunters X: Searching for nearby neighbors of 75 planet and eclipsing binary candidates from the K2-Kepler Extended Mission". The Astronom J. 151(6), 2016. Link
Wang J., Fischer D.A., Barclay T. et al. - "Planet Hunters VIII. Characterization of 41 long-period exoplanet candidates from Kepler archival data". The Astrophys. J. 815(2), 2015. Link
Boyajian T.S., LaCourse D.M. et al. - "Planet Hunters IX. KIC 8462852 – Where’s the flux?". Monthly Not. of the Royal Astron. Soc. 457 (4), 2015. Link
Kato T., Osaky Y. - "GALEX J194419.33+491257.0: An unusually active SU UMa-type dwarf nova with a very short orbital period in the Kepler data". Astron Society of Japan 66(2), 2014. Link
Schmitt J.R., Agol R. et al. - "Planet Hunters. VII. Discovery of a New Low-mass, Low-density Planet (PH3 C) Orbiting Kepler-289 with Mass Measurements of Two Additional Planets (PH3 B and D)". The Astrophys.J. 795, 2014. Link
Schmitt J.R., Wang J. et al. - "Planet Hunters. VI. An indipendent characterization of KOI-351 and several long period planet candidates from the Kepler archival data". The Astronom J. 148(28), 2014. Link
Wang J., Fischer D.A., Barclay T. et al. - "Planet Hunters V. A Confirmed Jupiter-Size Planet in the Habitable Zone and 42 Planet Candidates from the Kepler Archive". Astrophys J. 776(10), 2013. Link
Gies D.R., Guo Z., Howell S.B. et al. - "Planet Hunters: KIC 9406652: An Unusual Cataclysmic Variable in the Kepler Field of View". Astrophys J. 775(1), 2013. Link
Gies D.R., Guo Z. et al. - "KIC 9406652: An Unusual Cataclysmic Variable in the Kepler Field of View". The Astrophys.J. 775, 2013. Link
Lintott C., Swhamb M.E. et al. - "Planet Hunters: new Kepler planet candidates from analysis of Quater 2". The Astronom J. 145(6), 2013. Link
Swhamb M.E., Orosz J.A. et al. - "Planet Hunters: A Transiting Circumbinary Planet in a Quadruple Star System". The Astronom J. 768(2), 2013. Link
Fischer D.A., Schwamb M.E. et al. - "Planet Hunters: the first two planet candidates identified by the public using the Kepler public archive data". Monthly Not. of the Royal Astron. Soc. 419(4), 2012. Link
Schwamb M.E., Lintott C.J. et al. - "Planet Hunters: Assessing the Kepler Inventory of Short-period Planet". Astrophys J. 754(2), 2012. Link
Jackson C. - "Motivating Participation through Novelty Cues". PHD Thesis, 2020. Link
Laraia M., Wright D. et al. - "Efficient Label Gathering for Machine Training: Results from Muon Hunter 2". Intern Cosmic Ray Conf, 2019. Link
Barr A.J., Haas A. - "Citizen Scientist Community Engagement with the HiggsHunters project at the Large Hadron Collider". Research for All Journal 2(2), 2018. Link
Feng Q., Jarvis J. - "A citizen-science approach to muon events in imaging atmospheric Cherenkov telescope data: the Muon Hunter". Sissa Proc of Science, 2017. Link
Jackson C., Crowston K. et al. - "Working in the Shadows: Anonymous Contributions by Users in Citizen Science". 2017. Link
Bird R., Daniel M.K. et al. - "Muon Hunter: a Zooniverse project". TAUP 2017. Link
Haas A. - "HiggsHunters - a citizen science project for ATLAS". Atlas Softw Proceeding at Cern, 2017. Link
Barr A.J., Kalderon C.W. - "'That looks weird' - evaluating citizen scientists' ability to detect unusual features in ATLAS images of LHC collisions". The Atlas Comunication, 2016. Link
Progetto "Cairo Geniza"
Dudley M., Reader S. - "Serendipity in the Cairo Geniza". Startwords 2, 2021. Link
Progetto "Etch a Cell"
Smith P., King O.N.F. et al. - "Online citizen science with the Zooniverse for analysis of biological volumetric data". Link
Jackson C., Lin R. et al. - "Participation Through Perspective: How Perceptions Shape Participation in Virtual Citizen Science". SSRN 2026. Link
Dowthwaite L., Spence A. et al. - "Exploring the Relationship between Basic Psychological Needs and Motivation in Online Citizen Science". ACM Transac on Social Comput 8(1-2), 2025. Link
Beck S., Fraisl D. et al. - "Multi-disciplinary perspectives on citizen science – synthesizing five “paradigms” of citizen involvement". Citizen Science : Theory & Practice 9(1), 2024. Link
Trouille L., Clifton J.L. et al. - "Unlocking Astronomical Discoveries: Harnessing Zooniverse and Machine Learning for Large Data Sets". Bulletin of the Amer Astr Soc 56(2), 2024. Link
Ponti M., Kloetzer L. et al. - "Can't we all just get along? Citizen scientists interacting with algorithms". Human Computation 8(2), 2021. Link
Khairunissa I., Khodursky S. et al. - "Gender Imbalance and Spatiotemporal Patterns of Contributions to Citizen Science Projects: the case of Zooniverse". Front. Phys. 9, 2021. Link
Barbosu S., Gans J.S. - "Storm crowds: Evidence from Zooniverse on crowd contribution design". Research Policy 51(1), 2021. Link
Fortson L. - "A Brief Tour of the Zooniverse: How Crowdsourcing Science is Solving Big Data Problems in Research". APS April Meeting 65(2), 2020. Link
Herodotou H., Aristeidou M. et al. - "What Do We Know about Young Volunteers? An Exploratory Study of Participation in Zooniverse". Citizen Science: Theory and Practice 5(1), 2020. Link
Johnson L., Trouille L. et al. - "Unlocking Your Data Through People-Powered Research with the Zooniverse". Bulletin of the Amer Astron Soc 52(6), 2020. Link
Lintott C.J. - "Citizen science: The past 200 years". Astronomy&Geophysics 61(2), 2020. Link
Shanley L.A. - "People-powered discovery". Science 367(6474), 2020. Link
Desjardins R. - "Are Citizen Science “Socials” Multilingual? Lessons in (Non)translation from Zooniverse". When Transl goes digital book, 2020. Link
Trouille L., Lintott C.J. - "Zooniverse Project Builder Platform". Americ Astron Soc Meeting #235, 2020. Link
Jennings P., Lintott C.J. - "Notes and News: Into the Zooniverse: An interview with Prof Chris Lintott". J of the British Astronom Assoc 130(1), 2020. Link
Lintott C.J - "The crowd and the cosmos: adventures in the Zooniverse". OUP Oxford, 2019. Link
Truille L., Lintott C.J et al. - "Citizen science frontiers: Efficiency, engagement, and serendipitous discovery with human–machine systems". PNAS 116(6), 2019. Link
Crowston K, Mitchell E.M et al. - "Coordinating Advanced Crowd Work:Extending Citizen Science". 51st Hawaii International Conference on System Sciences, 2018. Link
Segal A., Kamar E. et al. - "Optimizing Interventions via Offline Policy Evaluation: Studies in Citizen Science". AAAI Conf on Artific Intell, 2018. Link
Fortson L., Lintott C. et al. - "Optimizing the Human-Machine Partnership with Zooniverse". ACM Collective Intelligence Conf, 2018. Link
Lintott C., Truille L.- "Zooniverse, the online repository for Citizen Science". J of World Syst Research 24(1), 2018. Link
Spiers H., Swanson A. et al. - "Patterns of Volunteer Behaviour Across Online Citizen Science". The Web Conference, 2018. Link
Zevin M., Coughlin S. et al. - "Gravity Spy: Integrating Advanced LIGO Detector Characterization, Machine Learning, and Citizen Science". Classical and Quantum Gravity 34(6), 2017. Link
Darch P.T. - "When Scientists Become Social Scientists: How Citizen Science Projects Learn About Volunteers". Intern J of Digital Curation 12(2), 2017. Link
Watson D., Floridi L. - "Crowdsourced science: sociotechnical epistemology in the e-research paradigm". Synthese, 2016. Link
Yadav P., Darlington J. - "Design Guidelines for the User-Centred Collaborative Citizen Science Platforms". Human Computation 3(1), 2016. Link
Masters K., Lintott C. et al. - "Science Learning via Participation in Online Citizen Science". Journal of Science Communic 15(3), 2016. Link
Ponciano L., Brasileiro F. et al. - "Considering human aspects on strategies for designing and managing distributed human computation". J of Internet Services and Appl 5(10), 2014. Link
Darch P. - "Managing the Public to Manage Data: Citizen Science and Astronomy". Int Journal of Digital Curation 9(1), 2014. Link
Madison M.J. - "Commons at the Intersection of Peer Production, Citizen Science, and Big Data: Galaxy Zoo". Legal Studies Research Paper Series 35, 2014. Link
Reed J., Raddick M.J. et al. - "An Exploratory Factor Analysis of Motivations for Participating in Zooniverse, a Collection of Virtual Citizen Science Projects". 46th Hawaii Int Conf on System Science, 2013. Link
Carol C., Lintott C. - "Citizen Science:Contributions to Astronomy Research". Arxiv, 2012. Link
Borne K.D. - "The Zooniverse: A Framework for Knowledge Discovery from Citizen Science Data". American Geophysical Union Fall Meeting, 2011. Link
Progetti Italiani
(Italian's projects)
Gene@Home (Tn-Grid)
--2023--
Pilati S, Moser C. et al. - "Using OneGenE and Grapedia Resources to Support Research in Grapevine Physiology". GRAPEDIA Annual Meeting, 2023. Link
Dolgaleva D., Pelagalli C. et al. - "Pair of Genes: Technical Validation of Distributed Causal Role Attribution to Gene Network Expansion". Lecture Notes in Computer Science 14098 (2023). Link
--2022--
Dolgaleva D., Pelagalli C. et al. - "Distributed Computing for Gene Network Expansion in R Environment". Lecture Notes in Computer Science 13708 (2022). Link
--2021--
Pilati S., Malacarne G. et al. - "Vitis OneGenE: A Causality-Based Approach to Generate Gene Networks in Vitis vinifera Sheds Light on the Laccase and Dirigent Gene Families". Biomolecules 11(12), 2021. Link
--2020--
Blazieri E., Tebaldi T. et al. - "A Computing System for Discovering Causal Relationships among Human Genes to Improve Drug Repositioning". IEEE Transaction on Emerging topics in Comput, 2020. Link
Pilati S., Malacarne G. et al. - "Finding functional interactions among grapevine genes using transcriptomic data and NES2RA algorithm". Intergrape Conference 2020. Link
--2019--
Masera L. - "Multi-target Prediction Methods for Bioinformatics". Phd Thesis, 2019. Link
Asnicar F., Masera R. et al. - "OneGenE: Regulatory Gene Network Expansion via Distributed Volunteer Computing on BOINC". 27th Euromicro Intern Conf on Parallel, Distrib and Network-Base Process (PDP), 2019. Link
--2018--
Malacarne G., Pilati S., Asnicar F. et al. - "Discovering causal relationships in grapevine expression data to expand gene networks. A case study: four networks related to climate change". Front Plant Sci, 2018 Link
Asnicar F., Masera L., Coller E., Cavecchia V. et al. - "NES2RA: Network expansion by stratified variable subsetting and ranking aggregation". Inter J of High Perform Comput 32(3), 2018. Link
--2017--
Rumyantsev A., Blazieri E., Cavecchia V. et al. - "On Distributed R Computations over BOINC". Proceeding of BOINC FAST 2017. Link
--2015--
Asnicar F., Sella N., Morettin P., Cavecchia V. et al. - "TN-Grid and Gene@home project: Volunteer Computing for Bioinformatics". BOINC:FAST 2015. Link
Erculiani L., Asnicar F., Sella N., Cavecchia V. et al. - "Discovering Candidates for Gene Network Expansion by Variable Subsetting and Ranking Aggregation". Network Biology in SIG Poster, 2015. Link
--2014--
Cavecchia V. - "Gene@Home - Computational Biology project for GEne Networks Expansion on a Distibuited Platform". 10th Boinc Workshop, 2014. Link
Blanzieri E., Moser C., Cavecchia V, SCC11 Team - "Gene@Home - GEne Network Expansion". ICT Days, 2014. Link

Pieraccini S., Conti S., Chaurasia S., Sironi M. - "Modelling the effect of osmolytes on peptide mechanical unfolding". Chem Physics Letters 578, 2013. Link
Progetti Chiusi
(Closed)
Abc ° Acustics ° Anderson Attack ° Aqua ° Astropulse ° Bealf ° BraTS ° CAS ° Chess ° Climate ° Collatz ° Constellation ° Correlizer ° Cosmology ° CSG ° DG Putra ° DistribuitedDataMining ° Docking ° Drugdiscovery ° Edges ° Enigma ° EoN2 ° Extremadura ° Feynman ° Find/Fight Malaria ° Gaia ° Genome ° Hep ° Hydrogen ° Ibercivis ° Lattice ° Leiden ° MalariaControl ° Magnetism ° NanoHive ° NanoHub ° NetMax ° Neurona ° Nrg ° Oproject ° Optima ° Orbit ° Physiome ° Poem ° Pogs ° Predictor ° Primaboinca ° Proteins ° PucBi ° QMC ° QuChemPedia ° Rectilinear Crossing Number ° RenderFarm ° RiojaScience ° Sat ° ScreensaverLifeSaver ° Simap ° Spinhenge ° SuperLink ° Sztaki ° TACC ° Tampaku ° Terrain ° Ufluids ° Uspex ° Van Der Waerden Numbers ° VGTU ° Virtual Prairie ° Volpex ° VRS ° Xansons4Code

Martin G., Miao W. - "ABC Triples". Arxiv, 2014. Link
Palenstijn W.J. - "Enumerating ABC Triples". DIAMANT/EIDMA Symposium, 2010. Link

Zaikin O., Petrov P. et al. - "Application of BOINC-based volunteer computing for comparison of the geoacoustic inversion algorithms efficiency". Grid 2018. Link
Zaikin O., Petrov P. et al. - "A Volunteer Computing Project for Solving Geoacoustic Inversion Problems". Open Engineering 7(1), 2017. Link
Zaikin O., Petrov P. et al. - "A GPU-enabled Black-box Optimization in Application to Dispersion-based Geoacoustic Inversion". Optima 2017. Link
Petrov P., Zaikin O. - "Application of iterative hill climbing to the sound speed profile inversion in underwater acoustics". IOP Conference on Materials, 2017. Link
Petrov P., Zaikin O. - "High-Performance Computing in the study on the Accurancy of the bottom Parameters Reconstruction using two different Fitness Functions". Proc of UACE 2017. Link
Zaikin O., Petrov P. et al. - "Using Volunteer Computing for Sound Speed Profile Estimation in Underwater Acoustics". Proceeding of Boinc:Fast 2017. Link
Bulavintsev V., Zaikin O., Semenov A. - "A Bitslice Implementation of Anderson’s Attack on A5/1". Open Engin 8, 2017. Link
Bulavintsev V., Zaikin O., Semenov A. - "Implementation of a Brute Force Attack on the A5/1 Keystream Generator in a GPU - based Volunteer Computing Project". Proceeding of Boinc:Fast 2017. Link
Bulavintsev V., Zaikin O., Semenov A. - "Volunteer-computing-based implementation of the Anderson attack on the stream cipher A5/1". 5th Conf Nation Supercomp, 2016. (In Press)

--2011--
Karimi K., Dickson N., Hamze F. - "High-Performance Physics Simulations Using Multi-Core CPUs and GPGPUs in a Volunteer Computing Context". J of High Perform Comp Applic 24(1), 2011. Link
Dickson N., Karimi K. et al. - "Importance of Explicit Vectorization for CPU and GPU Software Performance". Journal of Computational Physics 230(13), 2011. Link
Karimi K. et al. - "Investigating the Performance of an Adiabatic Quantum Optimization Processor". Quantum Information Processing, 2011. Link
--2010--
Hamze F., Dickson N., Karimi K. - "Robust Parameter Selection for Parallel Tempering". International Journal of Modern Physics C 21(5), 2010. Link

--2014--
Gautam A., Siemion A. et al. - "SETI Searches for Radio Transients from Kepler Field Planets and Astropulse Candidates". AAS Meetings 224, 2014. Link
--2013--
Korpela E., Anderson D. - "Astropulse: A Search for Microsecond Transient Radio Signals Using Distributed Computing". Astrophysical Journal 767(1), 2013. Link
--2010--
Siemion A., Von Korff J., Korpela E. et al. - "New SETI Sky Surveys for Radio Pulses". Acta Astr. 67(1342), 2010. Link
--2009--
Van Korff J., Werthimer D., Korpela E. - "Astropulse: a Multibeam Sky Survey for Microsecond Transient Radio Signals using Arecibo Observatory". Phd Thesis, 2009. Link
--2007--
Korpela E., Werthimer D., Cobb J., Anderson D. et al. - "Astropulse and Fly's Eye: SETI Searches for Transient Radio Signals Using Distributed Computing". Bioastronomy 420, 2007. Link
Lukasz Swierczewski - "Testing Beal conjecture using supercomputers and distributed computing platform BOINC". Master Thesis, 2015. Link
Coss R. - "Weak Shear Study of Galaxy Clusters by Simulated Gravitational Lensing". Phd Thesis, 2010. Link
Coss R., Flores R. - "Gravitational Lensing Shear Simulations Using Fast Fourier Transform". NASA Missouri Space Grant Consortium, 2009. Link
Coss R., Flores R. - "BRaTS@Home and BOINC Distributed Computing for Parallel Computation". American Astronomical Society 40, 2008. Link

Protein Structure + High Energy Physics + Nanotechnologies + Project Infrastructure
--2015--
Bu D. - "TreeThreader - Predicting protein structure by using cloud computing". Conference Open Science at the Global Scale: Sharing e-Infrastructures, Sharing Knowledge, Sharing Progress, 2015. Link
--2014--
Legrand A. - "Replication and redundancy in Boinc - Cas@Home case". 10th Boinc Workshop, 2014. Link
--2013--
Wenjing W., Chen G. - "Harness public computing resources for protein structure prediction computing". Inter Sympos on Grid and Clouds, 2013. Link
Wenjing W. - "Cas@Home Status". The 9th BOINC Workshop, 2013. Link
--2011--
Shao M., Wang S., Wang C., Yuan X. et al. - "Research Incorporating Ab Initio energy into threading approaches for protein structure prediction". BMC Bioinformatics 12(1), 2011. Link
--2016--
Kan W. - "Enabling volunteer computing for the BESIII Simulation system". CHEP 2016. Link
--2011--
Wenjing W. - "Port Boss on CAS". CERN OpenLab 2011. Link
--2010--
Wu J. - "BOSS and LHC computing using CernVM and BOINC". CERN OpenLab 2010. Link
--2012--
Wan Y. - "Make full use of free computing resources: An introduction of how to run a LAMMPS job on CAS@home". Group Meeting Scheduled Tsinghua University, 2012. Link
Wu W. - "Port BOSS on Cas", IHEP-CC, 2011. Link
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Jeannot E., Kondo D. - "Distributing Chess Computation for Desktop GRID". ALEAE Meeting, 2010. Link
Yi S., Jeannot E. - "Distributed Chess AI Computation through RT-BOINC". 3rd ALEAE Meeting, 2009. Link

--2013--
Li J., Li Z. et al. - "Cloud-Enabled Climate@Home". Spatial Cloud Computing: A practical Approach Book, 2013. Link
--2011--
Yang C., Bambacus M., Freeman S. et al. - "A Computing Infrastructure for Supporting Climate Studies". American Geophysical Union Meeting, 2011. Link
Xu C., Yang C., Bambacus M. et al. - "Climate@Home: Crowdsourcing Climate Change Research". American Geophysical Union Meeting, 2011. Link
--2010--
Freeman S., Boller R.A., Yang C. et al. - "Using an Open-Source Grid Framework and Virtualization for Embarrassingly Parallel Computations". American Geophysical Union Meeting, 2010. Link
Sun M., Li J., Huang Q. - "Be a Citizen Scientist for Climate Change". GIS Days, 2010. Link
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Barina D. - "Convergence verification of the Collatz problem". J of Supercomp, 2020. Link

--2015--
Hornig A., Birkeland R. et al. - "Opportunities of an open-source global senso network monitoring the radio spectrum for the (new) space community". 66th Internat. Astronautical Congress, 2015. Link
Hornig A., Homeister M. - "TYCHO: Demonstrator and operational satellite mission to Earth–Moon-Libration point EML-4 for communication relay provision as a service". Acta Astronautica 108, 2015. Link
--2013--
Hornig A., Eversmeyer T., Beyermann U. - "Distributed Ground Station Network - a global system for tracking and communication with small satellites as an open service". 64th International Astronautical Congress, 2013. Link
--2011--
Hornig A. - "Building a Distributed Satellite Ground Station Network - A Call To Arms". 28th Chaos Communication Congress, 2011. Link
Hornig A. - "Constellation Platform - A distributed super-computer for aerospace science". Poster at 6th OpenFOAM Workshop, 2011. Link

--2019--
Knoch T.A. - "Simulation of different three-dimensional polymer models of interphase chromosomes compared to experiments–an evaluation and review framework of the 3D genome organization". Seminars in Cell & Devel Biol 90, 2019. Link
--2018--
Knoch T.A. - "A Guided Protocol for Array Based T2C: A High-Quality Selective High-Resolution High-Throughput Chromosome Interaction Capture". Current Protoc in Human Genetics 99(1), 2018. Link
--2016--
Knoch T.A., Abuseiris A. et al. - "The detailed 3D multi-loop aggregate/rosette chromatin architecture and functional dynamic organization of the human and mouse genomes". Epigenetics Chromatine 9, 2016. Link
--2010--
Abuseiris A., Emmen A., Knoch T.A. - "Porting and Use of “Correlizer” to Investigate DNA Sequence Correlations". 3rd Almeregrid Desktop Experience, 2010. Link
--2009--
Knoch T.A., Göker M. et al. - "Fine-structured multi-scaling long-range correlations in completely sequenced genomes—features, origin, and classification". Eur. Biophys. J., 2009. Link
--2008--
Knoch T.A., Baumgartner V. et al. - "Large-Scale Resource Sharing at Public Funded Organizations". 4th International Conference on e-Social Science, 2008. Link

--2020--
Leclercq F., Wandelt B.D. et al. - "Perfectly parallel cosmological simulations using spatial comoving Lagrangian acceleration". Arxiv, 2020. Link
--2017--
Millea M., Aghanim N., Ballardini M. et al. - "Planck 2016 intermediate results. LI. Features in the cosmic microwave background temperature power spectrum and shifts in cosmological parameters". Astronomy & Astrophysics 607(95), 2017. Link
--2015--
Millea M. - "Finding a Theory of the Universe with Docker and Volunteer Computers". DockerCon EU 2015. Link
Millea M. - "Planck ΛCDM Parameters and Cosmology@Home". Berkley Computing the Universe Conference, 2015. Link
--2008--
Fendt W.A., Wandelt B.D. - "PICO: Parameters for the impatient cosmologist". The Astrophys J. 654, 2008. Link
--2007--
Fendt W.A., Wandelt B.D. - "Computing High Accurancy Power Spectra with PICO". The Astrophys J., 2007. Link

Dna + Wildlife + SubNetSum + Climate Tweet
--2015--
Zarns K, Desell T., Nechaev S., Dhasarathy A. - "Searching the Human Genome for Snail and Slug With DNA@Home". EScience Conference, 2015. Link
--2012--
Desell T., Newberg L.A., Szymanski B.K. et al. - "DNA@Home: Using Volunteered Computers for Finding Transcription Factor Binding Sites". 2nd Intern Congr on Comput Applic and Comput Science vol. 144, 2012. Link
--2011--
Desell T., Newberg L.A., Szymanski B.K. et al. - "Finding Protein Binding Sites Using Volunteer Computing Grids". 2nd International Congress on Computer Appl and Comput Science (CACS 2011). Link
--2019--
Bowley C., Mattingly M. et al. - "An analysis of altitude, citizen science and a convolutional neural network feedback loop on object detection in Unmanned Aerial Systems". J of Comput Syst 34, 2019. Link
--2018--
Bowley C., Mattingly M. et al. - "Detecting Wildlife in Unmanned Aerial Systems Imagery Using Convolutional Neural Networks Trained with an Automated Feedback Loop". Intern Conf on Comput Science, 2018. Link
Desell T. - "Accelerating the evolution of convolutional neural networks with node-level mutations and epigenetic weight initialization". Genetic and Evol Comput Conf Companion GECCO, 2018. Link
--2017--
Desell T. - "Developing a Volunteer Computing Project to Evolve Convolutional Neural Networks and Their Hyperparameters". EScience Conf, 2017. Link
Bowley C, Barnas A., Desell T. et al. - "Toward Using Citizen Scientists to Drive Automated Ecological Object Detection in Aerial Imagery". EScience Conf, 2017. Link
Desell T. - "Large Scale Evolution of Convolutional Neural Networks Using Volunteer Computing". Gecco. Link
--2016--
Barnas A., Mattingly M., Desell T. et al. - "Developing a Citizen Science Web Portal for Manual and Automated Ecological Image Detection". 12th IEEE EScience. Link
Bowley C., Andes A., Desell T. et al. - "Detecting Wildlife in Uncontrolled Outdoor Video using Convolutional Neural Networks". 12th IEEE EScience. Link
--2015--
Goehner K., Desell T., Eckroad R. et al. - "A Comparison of Background Subtraction Algorithms for Detecting Avian Nesting Events in Uncontrolled Outdoor Video". EScience Conference. Link
Desell T., Goehner K., Andes A. et al. - "On the Effectiveness of Crowd Sourcing Avian Nesting Video Analysis at Wildlife@Home". Procedia Comput Science 51. Link
Palarski J., Conrad N. - "Predation and Parental Care at Blue-Winged Teal (Anas discors) Nests in North Dakota". The Wildlife Society's 22nd Conference. Link
Saul A., Eckroad R.A., Goehner K. et al. - "Effectiveness of Citizen Science vs Expert Observation in Classification of Nesting Bird Behaviors Captured on Camera". The Wildlife Society's 22nd Conference. Link
--2014--
Desell T., Ellis-Felege S.N. et al. - "A Bird’s Eye View of ... Birds. Combining Technology and Citizen Science for Conservation." The Wildlife Professional. Link
Goehner K, Desell T. - "Computer Vision to Aid in WIldlife Surveillance". The 2014 EPSCoR/IDeA Conference. Link
Desell T., Ellis-Felege S.N. et al. - "Wildlife@Home: Conservation Outreach Using Nest Cameras, Citizen Science and Computer vision". The North Dakota Chapter of the Wildlife Society Conference. Link
--2013--
Desell T., Marsh R., Goehner K. et al. - "Wildlife@Home: Combining Crowd Sourcing and Volunteer Computing to Analyze Avian Nesting Video". 9th IEEE International Conf on E-Science. Link
O'Neil T., Desell T. - "Empirical Support for the High-Density Subset Sum Decision Threshold". 14th IEEE Canadian Workshop on Information Theory (CWIT'15), 2015. Link
Kirilenko A.P., Desell T. et al. - "Crowdsourcing Analysis of Twitter Data on Climate Change: Paid Workers vs. Volunteers". Sustainability 9(11), 2017. Link
Sjaugi M.F., Latip R. et al. - "DG@PUTRA : An experience in integrating desktop and service grid at University Putra Malaysia". Edges Seminaries, 2012. Link

--2013--
Schlitter N., Falkowski T., Lässig J. - "DenGraph-HO: a density-based hierarchical graph clustering algorithm". Expert Systems 31(5), 2013. Link
Schlitter N. - "Distributed Data Analytics using RapidMiner and BOINC". Rapidminer International Conference, 2013. Link
--2011--
Schlitter N., Falkowski T., Lässig J. - "DenGraph-HO: Density-based Hierarchical Community Detection for Explorative Visual Network Analysis". 31st SGAI International Conference on Innovative Techniques and Applications of Artificial Int., 2011. Link
Voigt D., Eysholdt U. - "Identifying relevant analysis parameters for the classification of vocal fold dynamics". Journ of Acustic Society of America 130(4), 2011. Link
--2010--
Voigt D., Lohscheller J., Döllinger M., Yang A., Eysholdt U. - "Automatic diagnosis of vocal fold paresis by employing phonovibrogram features and machine learning methods". Comput. Methods Programs Biomed. 99(3), 2010. Link
Voigt D., Döllinger M. et al. - "Classification of functional voice disorders based on phonovibrograms". Artificial Intelligence Medicine 49(1), 2010. Link
Voigt D. - "Objective Analysis and Classification of Vocal Fold Dynamics from Laryngeal High-Speed Recordings". Kommunikationsstorungen - Berichte Aus Phoniatrie Und Padaudiologie Book, 2010. Link
--2009--
Falkowski T. - "Community Analysis in Dynamic Social Networks", 2009. Link
Schlitter N., Falkowski T. - "Mining the Dynamics of Music Preferences from a Social Networking Site". International Conference on Advances in Social Network Analysis and Mining, IEEE Computer Society, 2009. Link
Falkowski T. - "Community Analysis in Dynamic Social Networks". Goettingen: Sierke Verlag; 2009. Link
--2008--
Falkowski T., Schlitter N. - "Analyzing the Music Listening Behavior and its Temporal Dynamics Using Data from a Social Networking Site", 2008. Link
Schlitter N. A. - "Case Study of Time Series Forecasting with Backpropagation Networks". Fak. für Informatik; 2008. Link

2017 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008 - 2007 - 2006 - 2005 - 2004
--2017--
Zhang B., Estrada T., Cicotti P., Taufer M. et al. - "Enabling scalable and accurate clustering of distributed ligand geometries on supercomputers". Parallel Computing 63, 2017. Link
--2013--
Zhang B., Estrada T., Cicotti P., Taufer M. - "On efficiently capturing scientific properties in distributed Big Data without moving the data - A Case Study in Distributed Structural Biology using MapReduce". 16th IEEE International Conferences on Computational Science and Engineering, 2013. Link
Estrada T., Pusecker M., Torres M., Cohoon J., Taufer M. - "Benchmarking Gender Differences in Volunteer Computing Projects". 3rd Workshop on Analyzing and Improving Collaborative eScience with Social Networks (eSoN), 2013. Link
--2012--
Matheny M, Schlachter S., Crouse L., Kimmel E., Estrada T., Taufer M. et al. - "ExSciTecH: Expanding Volunteer Computing to Explore Science, Technology, and Health". 2nd workshop on Analyzing and Improving Collaborative eScience with Social Networks, 2012. Link
Estrada T.,Zhang B., Ciccotti P., Armen R., Taufer M. - "A scalable and accurate method for classifying protein-ligand binding geometries using a MapReduce approach". Computers in Biology and Medicine 42(7), 2012. Link
Estrada T.,Zhang B., Ciccotti P., Armen R., Taufer M. - "Reengineering high-throughput molecular datasets for scalable clustering using MapReduce". 14th IEEE International Conference on High Performance Computing and Communications, 2012. Link
--2011--
Rahaman O., Estrada T., Doren D., Taufer M., Brooks C.L., Armen R.S. - "Evaluation of Several Two-Step Scoring Functions Based on Linear Interaction Energy, Effective Ligand Size, and Empirical Pair Potentials for Prediction of Protein-Ligand Binding Geometry and Free Energy". J. Chem. Information and Modeling 51(9), 2011. Link
Estrada T. and Taufer M. - "Providing Application-Level Quality of Science in Volunteer Computing". 13th IEEE International Conference on High Performance Computing and Communications (HPCC-2011). Link
--2010--
Estrada T., R. Armen, Taufer M. - "Automatic Selection of Near-Native Protein-Ligand Conformations using a Hierarchical Clustering and Volunteer Computing". International Conference On Bioinformatics and Computational Biology (ACM-BCB),2010. Link
--2009--
Estrada T., Taufer M., Anderson D. - "Performance Prediction and Analysis of BOINC Projects: An Empirical Study with EmBOINC". Journal of Grid Computing 7(4), 2009. Link
Taufer M., Armen R.S., Chen J., Teller P.J., Brooks C.L. - "Computational Multi-Scale Modeling in Protein-Ligand Docking". IEEE Engineering in Medicine and Biology Magazine 28(2), 2009. Link
Atlas J., Estrada T., Decker K., Taufer M. - "Balancing Scientist Needs and Volunteer Preferences in Volunteer Computing using Constraint Optimization". International Conference on Computational Science (ICCS), 2009. Link
Estrada T., Reed K., Anderson D., Taufer M. - "EmBOINC: An Emulator for Performance Analysis of BOINC Projects". PCGrid Conferenze, 2009. Link
Estrada T., Reed K., Taufer M. - "Modeling Job Lifespan Delays in Volunteer Computing Projects". 9th IEEE International Symposium on Cluster Computing and Grid (CCGrid), 2009. Link
--2008--
Estrada T., Fuentes O., Taufer M. - "A Distributed Evolutionary Method to Design Scheduling Policies for Volunteer Computing". ACM Computing Frontiers, 2008. Link
--2007--
Lopez G., Taufer M., Teller P.J. - "Evaluation of IEEE 754 Floating-Point Arithmetic Compliance Across a Wide Range of Heterogeneous Computers". Richard Tapia Celebration of Diversity in Computing Conference, 2007. Link
Taufer M., Kerstens A., Estrada T., Flores D.A., Teller P.J. - "SimBA: a Discrete Event Simulator for Performance Prediction of Volunteer Computing Projects". International Workshop on Principles of Advanced and Distributed Simulation 2007 (PADS'07). Link
Taufer M., Kerstens A., Estrada T., Flores D.A., Zamudio R., et al. - "Moving Volunteer Computing towards Knowledge-Constructed, Dynamically-Adaptive Modeling and Scheduling". First Workshop on Large-Scale, Volatile Desktop Grids (PCGrid'07), 2007. Link
--2006--
Estrada T., Flores D.A., Taufer M., Teller P., Kerstens A., Anderson D. - "The Effectiveness of Threshold-based Scheduling Policies in BOINC Projects". 2st IEEE International Conference on e-Science and Grid Technologies,2006. Link
--2005--
Taufer M., Crowley M., Price D., Chien A.A., Brooks C.L. - "Study of an Accurate and Fast Protein-Ligand Docking Algorithm based on Molecular Dynamics". Concurrency and Computation: Practice and Experience. Volume 17, 2005. Link
Taufer M., Teller P.J, Anderson D., Brooks C.L. - "Metrics for Effective Resource Management in Global Computing Environments". 1st IEEE International Conference on e-Science and Grid Technologies, 2005. Link
Taufer M., Anderson D., Ciccotti P., Brooks C.L. - "Homogeneous Technique to Ensure Integrity of Molecular Simulation Results Using Public Resources". 14th Heterogeneous Computing Workshop, 2005. Link
--2004--
Taufer M., Crowley M., Price D., Chien A.A., Brooks C.L. - "Study of an Fast Protein-Ligand Docking Algorithm based on Molecular Dynamics". IEEE International Workshop on High Performance Computational Biology, 2004. Link

Berishvili V., Voronkov A. et al. - "Machine Learning Classification Models to Improve the Docking-based Screening: A Case of PI3K-Tankyrase Inhibitors". Molecular Informatics 37(11), 2018. Link
Voronkov A., Shultz J. - "Drugdiscovery@home - distributed volunteer computing project in the fields of cancer, aging and stem cells". SENS Research Conference 4, 2009. Link

Riguardanti l'infrastruttura Edges-Edgi (Concerning the Edges-Edgi infrastructure).
2015 - 2014 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008
--2015--
Kacsuk P., Farkas Z., Marosi A. et al. - "Desktop grid in the era of Cloud Computing". Grid Computing: Techniques and Future Prospects, 2015. Link
Fedak G. - "Contributions to Desktop Grid". Phd Thesis, 2015. Link
--2014--
Horvath F., Ittzes P. - "Supporting environmental modelling with Taverna workflows, web services and desktop grid technology". 7th Inter Congr on Envirmen Modelling and Software, 2014. Link
Visegradi A., Kovacs J., Kasuk P. - " Efficient extension of gLite VOs with BOINC based desktop grids". Future Gen. Comp. Syst. 32, 2014. Link
--2013--
Marosi A., Kovacs J., Kacsuk P. - "Towards a volunteer cloud system". Future Generation Computer Systems 29(6), 2013. Link
Ponciano L., Brasileiro F. - "Assessing Green Strategies in Peer-to-Peer Opportunistic Grids". J. of Grid Computing 11(1), 2013. Link
Hanappe P. - "Latest developments on energy measurements". 9th Boinc Workshop, 2013. Link
Visegradi A. - "Random Linear Coding in Distributed Storage Systems". 9th Boinc Workshop, 2013. Link
Delamare S., Fedak G., Kondo D. et al. - "Advanced QoS Prototype for the EDGI Infrastructure". EDGI JRA2, 2013. Link
Delamare S., Fedak G., Kondo D. et al. - "Intermediate QoS Prototype for the EDGI Infrastructure". EDGI JRA2, 2013. Link
Delamare S., Fedak G., Kondo D. et al. - "SpeQuloS: a QoS service for hybrid and elastic computing infrastructures". Cluster Computing, 2013. Link
--2012--
Grunzke R., Birkenheuer G, Blunk D., Breuers S., Brinkmann A. et al. - "A Data Driven Science Gateway for Computational Workflows", UNICORE Summit 15, 2012. Link
Terstyanszky G., Kiss T., Kukla T., Lichtenberger Z., Winter S., Greenwell P. et al. - "Application Repository and Science Gateway for Running Molecular Docking and Dynamics Simulations". Stud. Health. Tech. Inform. 175, 2012. Link
Acs S., Kovacs J., Terstyanszky G. - "Application Repository based evaluation of the EDGI infrastructure", MIPRO Conference 2012. Link
Boychenko S., Araujo F. - "Benchmarking the EDGI Infrastructure", INForum 2012. Link
Kacsuk P., Marosi A. - "Supporting Web 2.0 communities by volunteer desktop grids". Desktop Grid Computing Book, 2012. Link
Kacsuk P., Marosi A. - "Towards Hybrid Desktop Grid and Cloud Infrastructures".Desktop Grid Computing Book, 2012. Link
Sottrup C.U., Kovacs J. - "Transparent execution of ARC jobs on Desktop Grid resources". MIPRO, 2012. Link
Kovacs J., Keller M., Araujo F. et al. - "Monitoring UNICORE jobs executed on Desktop Grid resources". MIPRO, 2012. Link
Terstyanszky G., Kiss T., Kukla T., Lichtenberger Z. et al. - "Application Repository and Science Gateway for Molecular Docking and Diynamic Simulations". Stud.Health Technol. Inform 175, 2012. Link
Terstyanszky G., Kiss T., Kukla T., Winter S. et al.- "Combining Desktop and Service Grids to support e-Scientists to run Simulations". 5th International Conference on Distributed Computing and Grid-technologies in Science and Education, 2012. Link
Lodygensky O., Urbah E., Dadoun S., Simonet A. et al. - "FlyingGrid : from Volunteer Computing to Volunteer Cloud". Computing in High Energy and Nuclear Physics, 2012. Link
Mohammadmersad G. - "Investigating Volunteer Computing for Simul8, a Feasibility Study". Operational Research Society Simulation Workshop 2012. Link
Kecskemeti G., Kertesz A., Marosi A. et al. - "Interoperable Resource Management for Establishing Federated Clouds". 2012. Link
Delamare S., Fedak G., Kondo D., Lodygensky O. - "SpeQuloS: A QoS Service for BoT Applications Using Best Effort Distributed Computing Infrastructures". High Performance and Distribuited Computing Conference, 2012. Link
--2011--
Taylor S.J.R, Ghorbani M.,Mustafee N. et al. - "Distributed Computing and Modelling and Simulation: Speeding up Simulations and Creating Large Models". Winter Simulation Conference, 2011. Link
Davoli E., Meyer N. et al. - "Edges bridge technologies to interconnect service and desktop grid". Remote instrument service on e-infrastructure Book, 2011. Link
Kovacs J., Marosi A.C., Kacsuk P. - "GBAC: Virtualization based execution environment for Desktop Grids". Cracov Grid Workshop, 2011. Link
Kacsuk P. - "How to make Boinc-Based desktop grids even more popular?". IEEE International Symposium on Parallel and Distribuited Processing, 2011. Link
Delamare S. - "Hybrid Distributed Computing Infrastructure Experiments in Grid5000: Supporting QoS in Desktop Grids with Cloud Resources". Grid5000 Spring School, 2011. Link
Keller M., Kovacs J., Brinkmann A. - "Desktop Grids Opening up to UNICORE". Unicore summit 2011. Link
Kacsuk P. - "Enable the use of BOINC for new communities - the IDGF experience". 7th Boinc Workshop, 2011. Link
Kelley I. - "Attic Data Distribution Framework". 7th Boinc Workshop, 2011. Link
Schott B., Emmen A. - "Green Desktop-Grids: Scientific Impact, Carbon Footprint, Power Usage Efficency". Scalable Computing:Practice and Experience 12(2), 2011. Link
Elwaer A., Harrison A., Kelley I., Taylor I. - "Attic: A Case Study for Distributing Data in BOINC Projects". IEEE International Symposium on Parallel and Distribuited Processing, 2011. Link
Reynolds C.J., Winter S., Kiss T. et al. - "Scientific Workflow Makespan Reduction Through Cloud Augmented Desktop Grids". IEEE Conference on Cloud Computing Tech and Science, 2011. Link
Kertesz A., Farkas Z., Kacsuk P. - "Multi-level Brokering Solution for Interoperating Service and Desktop Grids". Lectures in Computer Science 6586, 2011. Link
Lovas R. - "The first year of DEGISCO: hybrid infrastructure and new applications based on BOINC". 7th Boinc Workshop, 2011. Link
Marosi A, Kecskemeti G., Kertesz A., Kacsuk P. - "FCM: an Architecture for Integrating IaaS Cloud Systems". 2nd International Conference on Cloud Computing, Grids and Virtualization, 2011. Link
Kiss T., Kelley I., Kacsuk P. - "Porting Computation and Data Intensive Applications to Distributed Computing Infrastructures Incorporating Desktop Grids". International Symposium on Grids and Clouds, 2011. Link
Elwaer A., Taylor I., Rana O. - "Preference Driven Server Selection in Peer-2-Peer Data Sharing Systems". 4th International Workshop on Data-Intensive distribuited Computing, 2011. Link
Marosi A., Kacsuk P. - "Workers in the Clouds". 19th Euromicro International Conference on Parallel, Distribuited and Network-Base Processing, 2011. Link
Kacsuk P., Kovaks J. - "Towards a Powerful European DCI Based on Desktop Grids". J. of Grid Computing 9(2), 2011. Link
--2010--
Marosi A.C., Kacsuk P. - "Sandboxing for Desktop Grids Using Virtualization". Parallel, Distributed and Network-Based Processing Conference, 2010. Link
Delamare S., Fedak G., Kondd D, Lodygensky O. - "SpeQuloS: A QoS Service for Hybrid Distributed Computing Infrastructures". Cluster Computing, 2010. Link
Schott B., Emmen A. - "Green Methodologies in Desktop-Grid. An invitation for discussion by the DEGISCO Project". Intern. Multiconference on Computer Science, 2010. Link
Emmen A. - "Desktop Grids take their place in the e-Science distributed computing infrastructure". Proc. Cracow Grid Workshop, 2010. Link
Marosi A., Kovas A. et al. - "The BinSys application on the EDGeS infrastructure". 3rd Almeregrid Workshop, 2010. Link
Farkas Z. - "Improved 3G Bridge scalability to support desktop grid executions". 6th Boinc Workshop, 2010. Link
Marosi A. - "Remote validation of BOINC results – The Web2Grid project". 6th Boinc Workshop, 2010. Link
--2009--
Marosi A. - "Virtualization for Desktop Grid Clients". 5th Boinc Workshop, 2009. Link
Balaton Z. - "3G-Bridge: Bridging the Gap between BOINC and Other Systems". 5th Boinc Workshop, 2009. Link
Terstyanszky G., Kiss T. - "Porting applications to the Grid using the EDGeS Application Development". 25th Open Grid Forum Meeting, 2009. Link
Urbah E., Kacsuk P., Farkas Z. et al. - "EDGeS: Bridging EGEE to BOINC and XtremWeb". J of Grid Computing, 2009. Link
Farkas Z. - "SG-DG Bridges". CERN Middleware Security Group Meeting, 2009. Link
Urbah E. - "Specific security needs of Desktop Grids". CERN Middleware Security Group Meeting, 2009. Link
Ivaki N.R., Ferreira D., Araujo F - "Benckmarking the 3G-Bridge in the EDGeS Infrastructure". Proc. Cracow Grid Workshop, 2009. Link
Kovaks J. - "Programming Applications for Desktop Grids". EDGes Summer School, 2009. Link
--2008--
Kiss T. - "Porting applications for a combined EGEE/Desktop Grid platform in the framework of the EDGeS infrastructure". EEGE, 2008. Link
Urbah E. - "Why does EDGeS need OGF PGI?". EDGes FP7 Inititive, 2008. Link
Progetto "Mopac"
Brandmaier S., Srivstava V., Tetko I. et al. - "MOPAC@home - A Structural Database for small chemical compounds". 3th Almeregrid Desktop Conference, 2010. Link
Progetto "ISDEP"
Riverol A., Bustos A. et al. - "ISDEP, a fusion application deployed in the EDGeS project". 3rd AlmereGrid Desktop Experience Workshop, 2010. Link
Progetto "Slinca"
2014 - 2013 - 2012 - 2011 - 2010 - 2009
--2014--
Gordienko Y. - "Change of Scaling and Appearance of Scale-Free Size Distribution in Aggregation Kinetics by Additive Rules". Physica A: Statistical Model, 412, 2014. Link
--2013--
Gatsenko O., Baskova O., Fedak G., Lodygensky O., Gordienko Y. - "From Quantity To Quality: Massive Molecular Dynamics Simulation of Nanostructures under Plastic Deformation". Desktop and Service Grid Distributed Computing Infrastructure, Computer Science, 14, 2013. Link
--2012--
Gatsenko O., Baskova O., Fedak G., Lodygensky O., Gordienko Y. - "Application of Desktop Grid Technology in Material Science". 5th Distributed Computing and Grid-technologies in Science and Education, 2012. Link
--2011--
Gatsenko O., Baskova O., Fedak G., Lodygensky O., Gordienko Y. - "Statistical Properties of Deformed Single-Crystal Surface under Real-Time Video". Monitoring and Processing in the Desktop Grid Distributed Computing Environment, Key Engineering Materials 465, 2011. Link
--2010--
Gatsenko O., Baskova O., Fedak G., Lodygensky O., Gordienko Y. - "Porting Multiparametric MATLAB Application for Image and Video Processing to Desktop Grid for High-Performance Distributed Computing". International Conference of Supercomputer, 2010. Link
Gatsenko O., Baskova O., Fedak G., Lodygensky O., Gordienko Y. - "Kinetics of Defect Aggregation in Materials Science Simulated in Desktop Grid Computing Environment Installed in Ordinary Material Science Lab". 3rd Grid Experience Workshop - Desktop Grid Applications for eScience, 2010. Link
--2009--
Gatsenko O., Gordienko Y. - "Desktop Grid Computing in Materials Science Lab - Example of Development and Execution of Application for Defect Aggregation Simulations". Proc. Cracow Grid Conf, 2009. Link
Progetto "Autodock"
Kiss T., Szmetanko G. et al. - "Molecular Docking Simulations on a Combined Desktop and Service Grid Infrastructure". 3rd AlmereGrid Desktop Experience Workshop, 2010. Link

Girard D.J. - "Breaking “Tirpitz”: Cryptanalysis of the Japanese-German joint naval cipher". Cryptologia 40(5), 2016. Link
Mac Gregor C. - "Uncrackable codes: The second world war's last Enigma". New Scientist 210(2813), 2011. Link

--2014--
Chill S.T., Welborn M. et al. - "EON: software for long time simulations of atomic scale systems". Modell Simul Mater Sci Eng 22, 2014. Link
--2009--
Xu L., Mei D., Henkelman G., - "Adaptive kinetic Monte Carlo simulation of methanol decomposition on Cu(100)". Journal Chemical Phys. 131, 2009. Link
Pedersen N A., Henkelman G., Schiøtz J., Jónsson H. - "Long time scale simulation of a grain boundary in copper". Journal Phys. 11, 2009. Link
Mei D., Xu L., Henkelman G. - "Potential energy surface of methanol decomposition on Cu(110)". Journal Chemical Phys. C 113, 2009. Link
--2008--
Xu L., Henkelman G. - "Adaptive kinetic Monte Carlo for first-principles accelerated dynamics". Journal Chemical Phys. 129(11), 2008. Link
--2003--
Henkelman G., Jónsson H. - "Multiple time scale simulations of metal crystal growth reveal importance of multi-atom surface processes". Phys. Rev. Lett. 90(11), 2003. Link
--2014--
Laredo J.L.J, Lombrana Gonzales D. et al. - "A Peer-to-Peer Approach to Genetic Programming". EuroGP 2014. Link
Laredo J.L.J., Bouvry P., Fernandez De Vega F. et al. - "Designing robust volunteer-based evolutionary algorithms". Genetic Programming and Evolvable Machines 15(1), 2014. Link
Fernandez De Vega F., Trujillo L. et al. - "A Hybrid ECJ+BOINC Tool for Distributed Evolutionary Algorithms". 2014. Link
--2010--
Lombrana Gonzales D., Fernandez De Vega F. et al. - "Characterizing fault tolerance in genetic programming". Future Generation Comp Syst. 26(6), 2010. Link
--2009--
Gonzalez D.L., De Vega F.F. et al. - "Increasing GP Computing Power for Free via Desktop GRID Computing and Virtualization". 17th Euromicro Inter. Confer. on Parallel, Distribuited and Network-base Processing, 2009. Link
--2008--
Lombrana Gonzales D., Fernandez De Vega F. et al. - "Increasing GP Computing Power via Volunteer Computing". PPSN 2008. Link
Lombrana Gonzales D., Fernandez De Vega F. et al. - "Interpreted Applications within BOINC Infrastructure". 2nd Ibergrid Conference, 2008. Link
--2007--
Cardenas Montes M., Vega-Rodriguez M.A. et al. - "Volunteer Computing, an Interesting Option for Grid Computing: Extremadura as Case Study". Lecture Notes in Computer Science 4805, 2007. Link
Chavez de la O F.; Rubio del Solar M. et al. - "A Genetic Programming infrastructure profiting from public computation resources". Spanish Conference on e-Science Grid Computing, 2007. Link
Perret-Gallix D. - "Simulate with Grace!". ASCFA Meeting, 2007. Link

--2014--
Jaafar H., Chubb A. et al. - "Visualization of a number of large datasets of compounds that have been tested for effectiveness against the Plasmodium Falciparum strain 3D7". Irish J. of Medical Science 183(12). Link
--2007--
Lavin P., Whelan N. - "Distributed biological screening through Volunteer Computing to find useful protein/drug matches for the purpose of malarial drug research". Degree of Master in Comput Science Univ of Dublin. Link
GAIA@HOME
Oszkiewicz D., Bartczak P. et al. - "Asteroid phase curve modeling with empirical correction for shape and viewing geometry". Icarus 446, 2026. Link
Przemyslaw B., Toni S-R. et al. - "Gaia@home: Combining Gaia catalogue with the power of volunteer computing". 16th Europlanet Science Congress, 2022. Link

--2003--
Larson S.M., Desjarlais J.R., Pande V. - "Sequence optimization for native state stability determines the evolution and folding kinetics of a small protein". J of Molec Biol 332(1), 2003. Link
Larson S.M., Garg A., Desjarlais J.R., Pande V. - "Increased detection of structural templates using alignments of designed sequences". Proteins: Structure, Function, and Genetics 51(3), 2003. Link
Larson S.M., Snow C.D., Shirts M.R., Pande V. - "Folding@Home and Genome@Home: Using distributed computing to tackle previously intractable problems in computational biology." Computational Genomics, 2003. Link
--2002--
Larson S.M., England J.L., Desjarlais J.R., Pande V. - "Thoroughly sampling sequence space: large-scale protein design of structural ensembles". Protein Science 11(12), 2002. Link
Larson S.M. - "Identifying structural templates using alignments of designed sequences." SAC-CASP, 2002. Link
--2001--
Larson S.M. - "Folding@home and Genome@home: Protein folding and design with distributed computing." Carleton University Biochemistry & Chemistry Society, 2001. Link
Du R., Shi J. et al. - "HEP@home: A Volunteer Computing Project to Run Fast Simulation with Delphes for CEPC". EPJ Web of Conf 295, 2024. Link
Amorin A., Villate J., Andrade P. - "HEP@Home - A distributed computing system based on BOINC". CHEP2004 on CERN Publications, 2004. Link

Shultz J. - "Modeling Biological Hydrogen Production". 4th Boinc Workshop, 2008. Link

Ibercivis infrastructure + Covid19 +Socientize + Amiloide + Bindsurf + Cells + Criticalidad + Cuanticables + Fusion+ Materiales + Neurosim + Prisioner Dilemma + Sanidad
Riguardanti l'infrastruttura Ibercivis
--2014--
Guerrero Hernandez G.D., Imbernon B. et al. - "A performance/cost evaluation for a GPU-based drug discovery application on volunteer computing". Biomed Research International, 2014. Link
--2011--
Ferred D. - "Boinc Balanced Multi Server Enviroment". 7th Boinc Workshop, 2011. Link
--2009--
Benito D., Castejon F., Castelo V. et al. - "Ibercivis: infrastructure, applications anddevelopment workflow". 3rd Ibergrid Conference, 2009. Link
--2008--
Rivero A. - "Ibercivis: status, configuration, and expectations". 4th Boinc Workshop, 2008. Link
--2007--
Antoli B., Castejon F., Giner A., Losilla G. et al. - "ZIVIS: A City Computing Platform Based on Volunteer Computing". 1st Ibergrid Conference, 2007. Link
De Salazar P.M., Ramos J. et al. - "Tenofovir and remdesivir ensemble docking with the SARS-CoV-2 polymerase and template-nascent RNA". Authorea, 2020. Link
--2016--
Silva C., Monteiro A.J., Manahl C. et al. - "Cell Spotting: Educational and Motivational Outcomes of Cell Biology Citizen Science Project in the Classroom". Journ of Science Communic 15(1). Link
--2015--
Serrano F. - "Green Paper on Citizen Science. Citizen Science for Europe: Towards a better society of empowered citizens and enhanced research". EU Conference. Link
Lostal E., Monteiro A.J. et al. - "Citizen Science in Education: Students Becoming Cell Biology Researchers". Citizen Science Conference. Link
Monteiro A.J., Silva G.C., Villar J.C. - "Cell Spotting - let's figth cancer together". Science in School Journal 31. Link
Sagarra O., Gutierrez-Roig M. et al. - "Citizen Science practices for Computational Social Sciences research: The conceptualization of Pop-Up Experiments". Front. Phys. 3(93). Link
--2014--
Serrano F. - "White paper on citizen science for Europe". Socientize Conference. Link
Silva C.G., Brito R.M.M, Monteiro A. et al. - "SOCIENTIZE participatory experiments, dissemination and networking activities in perspective". Human Computation 1(2). Link
Ponciano L., Brasileiro F. - "Finding Volunteers’ Engagement Profiles in Human Computation for Citizen Science Projects". Human Comput 1(2). Link
--2013--
Serrano F., Brasileiro F. - "Semantics map application report". Link
Lostal E., Almonacid S. - "Cell Images Application Report".Link
--2017--
Jorge M. - "Predicting hydrophobic solvation by molecular simulation: 2. new united-atom model for alkanes, alkenes and alkynes". Computational Chemistry 38(6), 2017. Link
Jorge M., Simoes C.J.V., Garrido N.M et al. - "Predicting hydrophobic solvation by molecular simulation: 1. Testing united-atom alkane models". Computational Chemistry 38(6), 2017. Link
--2010--
Simoes C.J.V., Murkherjee T., Brito R.M. M., Jackson R.M. - "Toward the Discovery of Functional Transthyretin Amyloid Inhibitors: Application of Virtual Screening Methods", J. Chem. Inf. Model. 50(10), 2010. Link
Simoes C.J.V., Riviero A., Brito R.M. M. - "Searching for Anti-Amyloid Drugs with the Help of Citizens: the ‘AMILOIDE’ Project on the IBERCIVIS Platform". ERCIM News 82, 2010. Link
Simoes C.J.V., Riviero A., Taracon A., Serrano S., et al. - "Running faster and further together: the AMILOIDE project, the onset of the Portuguese participation on the Ibercivis volunteer computing network". IBERGRID’10, 2010. Link
--2014--
Guerrero G.D., Imbernon B., Sanz F. et al. - "A Performance/Cost Evaluation for a GPU-Based Drug Discovery Application on Volunteer Computing". BioMed Research International vol.2014, 2014. Link
--2013--
Lostal Lanza E., Serrano Sanz F., Carrodeguas Villar J.A., Martinez Alonso P. et al. - "Cell Images Analysis as a Case of Citizen Science for Advanced Education: Laboratory and School, Back and Forth". 7th International Technology, Education and Development Conference (INTED13), 2013. Link
Lostal Lanza E., Serrano Sanz F., Carrodeguas Villar J.A. et al. - "A case of Citizen Science for Cell Biology Images Analysis". 33th Congresso da Sociedade Brasileira de Computação (CSBC 2013), 2013. Link
--2010--
Martinez-Mendoza A.J., Mendez-Bermudez J.A., Varga I. - "Conductance statistics for the power-law banded random matrix model", IV Mexican Meeting on Experimental and Theoretical Physics, AIP Conf. Proc. 1319, 2010. Link
--2013--
Camjayi A., Arrachea L. - "Conductance of a quantum dot in the Kondo regime connected to dirty wires". Physical Review B 86, 235143 (2013). Link
--2010--
Bustos A., Castejon F., Fernandez L.A. , Garcia J. et al. - "Impact of 3D features on ion collisional transport in ITER". Nuclear Fusion 50(12), 2010. Link
--2009--
Velasco J.L., Castejon F., Tarancon A. - "Finite orbit width effect in ion collisional transport in TJ-II". Phys. Plasma 16, 2009. Link
--2008--
Castejon F., Serrano F. et al. - "Fusion Plasma Simulation in the Interactive Grid". Computing and Informatics 27, 2008. Link
--2012--
Fernandez L.A., Gordillo-Guerrero A., Martin-Mayor V., Ruiz Lorenzo J.J. - "Numerical test of the Cardy-Jacobsen conjecture in the site-diluted Potts model in three dimensions". Physical Review B 86, 2012. Link
--2012--
Cruz V.L., Ramos J., Martinez-Salazar J. - "Assessment of the Intrinsic Conformational Preferences of Dipeptide Amino Acids in Aqueous Solution by Combined Umbrella Sampling/MBAR Statistics. A Comparison with Experimental Results". J. Phys. Chem. B 116(1), 2012. Link
--2011--
Cruz V.L., Ramos J., Martinez-Salazar J. - "Water-Mediated Conformations of the Alanine Dipeptide as Revealed by Distributed Umbrella Sampling Simulations, Quantum Mechanics Based Calculations, and Experimental Data". J. Phys. Chem. B 115(16), 2011. Link
--2012--
Gracia Lazaroa C., Ferrer A., Ruiz G. et al. - "Heterogeneous networks do not promote cooperation when humans play a Prisoner’s Dilemma", PNAS 109(32), 2012. Link
--2011--
Ramos Garcia L.I., Almansa J.F. - "Technical Note: An algorithm to calculate the tissue phantom ratio from depth dose in radiosurgery", Medical Phisics 38(5), 2011. Link

2017 - 2015 - 2014 - 2013 - 2011 - 2010 - 2009 - 2008 - 2007 - 2005
--2017--
Regier J.C., Mitter C., "Further progress on the phylogeny of Noctuoidea (Insecta: Lepidoptera) using an expanded gene sample". Systematic Entomology 42(1). Link
--2015--
Bazinet A. - "Computational Methods to Advance Phylogenomic Workflows". Phd Thesis, 2015. Link
Bazinet A.L., Cummings M.P. - "Subdividing Long-Running, Variable-Length Analyses Into Short, Fixed-Length BOINC Workunits". Jour of Grid Comput 13(2). Link
--2014--
Bazinet A.L., Zwickl A., Cummings M. - "A Gateway for Phylogenetic Analysis Powered by Grid Computing Featuring GARLI 2.0". Systematic Biology 63(5). Link
--2013--
Bazinet A.L., Cummings M.P. - "Can RNA-Seq Resolve the Rapid Radiation of Advanced Moths and Butterflies (Hexapoda: Lepidoptera: Apoditrysia)? An Exploratory Study". PloS One 8(12). Link
Lloyd M.W., Campbell L., Neel M.C. - "The Power to Detect Recent Fragmentation Events Using Genetic Differentiation Methods". Plos One 8(5). Link
--2011--
Bazinet A.L., Cummings M.P. - "Computing the Tree of Life: Leveraging the Power of Desktop and Service Grids". IEEE International Sympos on Parallel and Distribuited Processing. Link
--2010--
Regier J.C., Zwick A., Cummings M.P. et al. - "Validating the Systematic Position of Plationus Segers, Murugan (Rotifera: Brachionidae) Using Sequences of the Large Subunit of the Nuclear Ribosomal DNA and of Cytochrome C Oxidase". Hydrobiologia 644(1). Link
Bazinet A.L. - "The Lattice Boinc Project - Public Computing for the Tree of Life". 6th Boinc Workshop. Link
--2009--
Bazinet A.L. - "The Lattice Project: A Multi-model Grid Computing System". PHD Thesis. Link
Regier J.C., Zwick A., Cummings M.P. et al. - "Toward reconstructing the evolution of advanced moths and butterflies (Lepidoptera: Ditrysia): an initial molecular study". BMC Evolutionary Biology 9. Link
--2008--
Bazinet A.L., Cummings M.P. - "The Lattice Project: a Grid research and production environment combining multiple Grid computing models". Grid Computing for Bioinformatics and Computational Biology Book. Link
Cummings M.P. - "BOINC as Part of a Comprehensive, Multi-resource Grid Computing System". 1st East Coast Boinc Meeting. Link
Myers D.S., Bazinet A.L., Cummings M.P. -"Expanding the reach of Grid computing: combining Globus and BOINC-based systems". Grid Computing for Bioinformatics and Computational Biology Book. Link
--2007--
Lee S., Wang T.D., Hashmi N., Cummings M.P. - "Bio-STEER: A Semantic Web workflow tool for Grid computing in the life sciences". Future Generation Computer Systems 23(3). Link
Bazinet, AL, Myers DS, Fuetsch J, Cummings MP. - "Grid Services Base Library: A high-level, procedural application programming interface for writing Globus-based Grid services". Future Generation Computer Systems 23(3). Link
--2005--
Cummings M.P., Huskamp J.C. - "Grid computing". Educause Review 40(116–17). Link

--2012--
Van der Meij D. - "Can a computer melt impure Gold - A dynamics simulation". LO3 Project Poster Leiden Univ., 2012. Link
Van der Geest M., Pavanello M. - " Thermodynamics of organic polymers from molecular dynamics simulations". LO3 Project Poster Leiden Univ., 2012. Link
Wijzenbroek L., Somers M.F., - "Static surface temperature effects on the dissociation of H2 and D2 on Cu(111)". Journal Chemical Phys. 137, 2012. Link
--2011--
Hanselman S., Diederen T. - "Melting point analysis for an FCC copper crystal using classical dynamics". LO1 Project Leiden Univ., 2011. Link
--2008--
Diaz C., Somers M.F. - "Application of Desktop Grid in Surface Science". Distributed & Grid Computing-Science Made Transparent for Everyone, RechenKraft, 2008. Link
Somers M.F. - "Leiden Classical, more than just a Boinc Project". 2nd Almeregrid Experience Workshop, 2008. Link
--2007--
Bouma H., Van Der Wijst H. - "The density maximum of water". Preuniv 2007. Link
Somers M.F. - "Dissociation of H2 molecules at a CU(111) surface using quasi-classical calculations". LO1 Project Leiden Univ., 2007. Link

2016 - 2015 - 2014 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008
--2016--
Penny M.A., Verity R., Bever C.A. et al. - "The public health impact and cost-effectiveness of malaria vaccine RTS,S/AS01: a systematic comparison of predictions and four mathematical models". Lancet 387. Link
--2015--
Penny M.A., Maire N., Bever C.A. et al. - "Distribution of malaria exposure in endemic countries in Africa considering country levels of effective treatment". Malar J 14. Link
Pemberton-Ross P., Smith T.A. et al. - "Age-shifting in malaria incidence as a result of induced immunological deficit: a simulation study". Malaria J. 14(287). Link
Penny M.A., Galactionova K. et al. - "The public health impact of malaria vaccine RTS,S in malaria endemic Africa: country-specific predictions using 18 month follow-up Phase III data and simulation models". BCM Medicine 13(170). Link
--2014--
Stuckey E.M., Stevenson J., Galactionova K. et al. - "Modeling the Cost Effectiveness of Malaria Control Interventions in the Highlands of Western Kenya". Plos One 9(10). Link
--2013--
Briet O.J.T., Penny M.A., Hardy D. et al. - "Effects of pyrethroid resistance on the cost effectiveness of a mass distribution of long-lasting insecticidal nets: a modelling study". Malaria Journal 12:77. Link
--2012--
Crowell V., Hardy D., Briet O., Chitnis N., Maire N., Smith T. - "Can we depend on case management to prevent re-establishment of P. falciparum malaria, after local interruption of transmission?". Epidemics 4. Link
Briet O.J.T., Hardy D., Smith T.A. - "Importance of factors determining the effective lifetime of a mass, long-lasting, insecticidal net distribution: a sensitivity analysis". Malaria Journal 11:20. Link
Smith T., Ross A., Maire M., Chitnis N., Studer A., et al. - "Ensemble Modeling of the Likely Public Health Impact of a Pre-Erythrocytic Malaria Vaccine". PLoS Med 9(1). Link
Maire N., Shilcutt S.D., WalkerM D.G., Tediosi F., Smith T.A. - "Cost-Effectiveness of the Introduction of a Pre-Erythrocytic Malaria Vaccine into the Expanded Program on Immunization in Sub-Saharan Africa: Analysis of Uncertainties Using a Stochastic Individual-Based Simulation Model of Plasmodium falciparum Malaria". Value in Health 14. Link
Brooks A., Briet O.J.T., Hardy D., Steketee R., Smith T.A. - "Simulated Impact of RTS,S/AS01 Vaccination Programs in the Context of Changing Malaria Transmission". PLoS ONE 7(3). Link
--2011--
Ross A., Maire N., Sicuri E., Smith T.A., Conteh L. - "Determinants of the Cost-Effectiveness of Intermittent Preventive Treatment for Malaria in Infants and Children". PLoS ONE 6(4). Link
Smith T.A., Chitnis N.,Briet O.J.T., Tanner M. - "Uses of mosquito-stage transmission-blocking vaccines against Plasmodium falciparum". Trends Parasitol. 27(5). Link
Bretscher M.T., Maire N., Chitnis N., Felger I., Owusu-Agyei S., Smith T.A. - "The distribution of Plasmodium falciparum infection durations". Epidemics 3. Link
--2010--
Krebs V. - "Motivations of cybervolunteers in an applied distributed computing environment: MalariaControl.net as an example". First Monday Journal 15(2), 2010. Link
N. Chitnis,A. Schapira,Smith T.A.,R. Steketee, "Comparing the effectiveness of malaria vector-control interventions through a mathematical model". J. Am. Trop. Med. Hyg. 83(2). Link
Carneiro I., Smith L., Ross A., Roca-Feltrer A., Greenwood B et al. - "Intermittent preventive treatment for malaria in infants: a decision-support tool for sub-Saharan Africa". Bulletin of the World Health Organization. Link
Ross A., Smith T.A. - "Interpreting malaria age-prevalence and incidence curves: a simulation study of the effects of different types of heterogeneity". Malaria Journal 9(132). Link
--2009--
Tediosi F., Maire N., Penny M.A., Studer A., Smith T.A. - "Simulation of the cost-effectiveness of malaria vaccines". Malaria Journal 8(127). Link
Gosoniu L., Vounatsou P., Sogoba P., Maire N., Smith T. - "Mapping malaria risk in West Africa using a Bayesian nonparametric non-stationary model". Computational Statistics and Data Analysis 53. Link
Maire N. - "Estimating parameters for mathematical models of malaria epidemiology". 5th Boinc Workshop. Link
--2008--
Penny M.A., Maire N., Studer A., Schapira A., Smithm T.A. - "What Should Vaccine Developers Ask? Simulation of the Effectiveness of Malaria Vaccines". PLoS ONE 3(9). Link
Ross A., Penny M., Maire N., Studer A., Carneiro I., et al. - "Modelling the Epidemiological Impact of Intermittent Preventive Treatment against Malaria in Infants". PLoS ONE 3(7). Link
Smith T.A., Maire N., Ross A., Penny M., Chitnis N., et al. - "Towards a comprehensive simulation model of malaria epidemiology and control". Parasitology 13. Link

Metlov K.L. - "Magnetization patterns in ferromagnetic nano-elements as functions of complex variable". Physic Rev. Lett. 105, 2010. Link

--2011--
Allis D.G., Helfrich B., Freitas R.A. et al. - "Analysis of Diamondoid Mechanosynthesis Tooltip Pathologies Generated via a Distributed Computing Approach". Journal of Computational and Theoretical Nanoscience 8, 2011. Link
--2008--
Helfrich B. - "NanoHive@Home - NanoSystems Simulation". Distributed & Grid Computing - Science Made Transparent for Everyone Book, 2008. Link

Clark S., Haley B. et al. - "nanoHUB@home: Expanding nano HUB Through Volunteer Computing". Gateways 2019 Conf, 2019. Link
Gesing S., Zentner M. et al. - "HUBzero: novel concepts applied to established computing infrastructures to address communities' needs". PEARC 2019. Link
Clark S., Hunt M. - "Modeling Uncertainty with nanoHUB tools using BOINC as a Computational Resource". Boinc Workshop 2018. Link
Clark S. - "Enabling BOINC as a nanoHUB computational platform". Boinc Workshop 2017. Link
--2015--
Kurochkin I. - "Adaptation of a conveyor processing method for the distributed computing on the BOINC platform". Proceeding of Boinc:Fast, 2015. Link
--2014--
Kurochkin I. - "NetMax@Home. The project of the voluntary distribuited computing". 6th Int. Conf. of Distribuited Computing and Grid Tech in Science and Educ, 2014. Link
--2015--
Acedo L., Lamprianidou E. et al. - "Firing patterns in a random network cellular automata model of the brain". Physica A: Statistical Mechanics and it's Applications 435, 2015. Link
--2013--
Acedo L., Villanueva-Oller J., Morano J.A. - "The Neurona@Home project: Simulating a large-scale cellular automata brain in a distributed computing environment". AIP Conference 1510(1), 2013. Link

--2015--
Samish I., Bourne P.E., Najmanovich R. - "Achievements and challenges in structural bioinformatics and computational biophysics". Bioinformatics 31(1), 2015. Link
Gaudreault F, Najmanovich R. - "FlexAID: Revisiting docking on non native-complex structures". J Chem Inf Model 55(7), 2015. Link
--2014--
Duchene D., Colombo E, Najmanovich R. et al. - "Analysis of Subpocket Selectivity and Identification of Potent Selective Inhibitors for Matriptase and Matriptase-2". Jour of Chem Medicine 57, 2014. Link
Naimanovich R.J., Samish I., Bourne P. - "Achievements and challenges in structural bioinformatics and computational biophysics". Bioinformatics Btu769, 2014. Link
Swierczewski L. - "The Distributed Computing Model Based on The Capabilities of The Internet". Arxiv, 2012. Link
2017 - 2015 - 2014 - 2013 - 2011 - 2010 - 2005
--2017--
Kurochkin I., Afanasiev, A. P. - "The voluntary distributed computing project Optima@home". Science. Business. Society. 2(2), 2017. Link
Kurochkin I. - "The Umbrella Project of Voluntary Distributed Computing Optima@home". Proceeding of Boinc:Fast 2017. Link
--2015--
Andrey Fomin, Yuri Orlov, Mikhail Posypkin, "Using Simulation to Study Performance of Parallel Tree Search Scheduler". Proceedings of Optimization and Applications (OPTIMA-2015), 2015. Link
Afanasiev, A. P., Bychkov, I. V., Manzyuk, M. O., "Technology for Integrating Idle Computing Cluster Resources into Volunteer Computing Projects". 5th Int Workshop on Computer Science and Engineering:WCSE 2015-IPCE. Link
--2014--
Afanasiev A., Putilina E. - "The signal recovery by multiple integrals and desktop-grid computing". 5th Inter Conf on Optimization Methods and Applications, 2014. Link
Tian B., Posypkin M.A. - "Efficient implementation of branch-and-bound method on desktop grids". Computer Science 15(3), 2014. Link
--2013--
Tian B., Posypkin M.A. - "BnBTest@HOME - A Distributed implementation of branch and bound method". 4th Int. Conf on Optimization Methods and Algorithms, 2013. Link
--2011--
Kholodkov K.I., Alshin I.M., Koryagin V.N. et al. - "Experience on Deploying a Grid Infrastructure for the Support of Computational Web Services". Scientific and Technical Information Processing 39(2), 2011. Link
Afanasiev A., Oferkin I. et al. - "A Comparative Study of Different Optimization Algorithms for Molecular Docking". 3rd Intern. Workshop on Science Gateways for Life Science (IWSG), 2011. Link
--2010--
Crochemore M., Kubica M., et al. - "Extracting Powers and Periods in a String from its Runs Structure". Lecture Notes in Computer Science 6393, 2010. Link
Sukhoroslov O.V. - "Running Bag-of-Tasks Applications in EGEE with MaWo". 5th EGEE User Forum, 2010. Link
Voloshinov V.V., Smirnov S. - "Error-Free Inversion of Ill-Conditioned Matrices in Distributed Computing System of RESTful-Services of Computer Algebra". 4th Intern. Conf. Distributed Computing and Grid-Technologies in Science and Education, 2010. Link
Neverov V.S., Voloshinov V.V., Afanisev A.P. et al. - "Distributed computing and optimization algorithms for interpretation of x-ray scattering by carbon nanostructures in the deposited films from TOKAMAK ?-10". 4th Intern. Conf. Distributed Computing and Grid-Technologies in Science and Education, 2010. Link
Sukhoroslov O.V. - "On Development of Grid-enabled Applications and Service-Oriented Scientific Environments." 4th Intern. Conf. Distributed Computing and Grid-Technologies in Science and Education, 2010. Link
--2005--
Kolpakov R., Kucherov G. - "Periodic Structures in Words". Encyclopedia of Mathematics and its Applications vol. 104, 2005. Link
Tricarico P. - "The near-Earth asteroid population from two decades of observations". Icarus 284, 2017. Link
Tomas Kulhanek - "Utilization of GRID technology in processing of medical information". Phd Thesis, 2015. Link
Kulhanek T., Silar J. et al. - "Service based identification of physiological system in desktop grid". Terena Network Conf, 2011. Link
Kulhanek T. - "Modelling and simulation of complex human physiology systems". Terena Network Conf, 2011. Link
Kulhanek T., Silar J. et al. - "Distribuited Computation and Parameter Estimation on Identification of Physiological Systems". VPH 2010. Link
Kulhanek T., Silar J. et al. - "Identification of physiological system - Application of desktop gridsystem Boinc". 2009.
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--2014--
Girrbach M., Meliciani I., Strunk T. et al. - "A fluorescence polarization assay for the experimental validation of an in silico model of the chemokine CXCL8 binding to receptor-derived peptides". Physical Chemistry Chemical Physics 17, 2014. Link
--2012--
Boeuf S., Strunk T. et al. - "Engineering hydrophobin DewA to generate surfaces that enhance adhesion of human but not bacterial cells". Acta Biomaterialia 8(3), 2012. Link
Strunk T., Wolf M., Wenzel W. - "Peptide structure prediction using distributed volunteer computing networks". J. of Mathematical Chemistry 50, 2012. Link
Strunk T., Wolf M., Wenzel W. et al. - "SIMONA 1.0: An efficient and versatile framework for stochastic simulations of molecular and nanoscale systems". J.of Comput Chem 33, 2012. Link
--2011--
Strunk T., Wenzel W., - "High Throughput peptide structure prediction with distributed volunteer computing networks". CMMSE 2011, 2011. Link
Strunk T., Anand P., Brieg M. et al., "Benchmarking the POEM@HOME Network for Protein Structure Prediction". IWSG, 2011. Link
--2010--
Strunk T., Wolf M., Wenzel W. - "Development and Evaluation of a GPU-optimized N-Body term for the simulation of biomolecules". SimLab@KIT Workshop, 2010. Link
--2009--
I. Meliciani, K. Klenin, Strunk T. - "Probing hot spots on protein-protein interfaces with all-atom free-energy simulation". J. of Chem Phys 131, 2009. Link
--2008--
Strunk T., Meliciani I., Wenzel W. et al., "Free-energy based all-atom protein folding using worldwide distributed computational resources". Computational Biophysics to Systems Biology (CBSB08), 2008. Link

--2016--
Chambers K.C., Magnier E.A., Thilker D. et al. - "The PAN-STARRS1 surveys". Instrum. and Meth. for Astrophysics, 2016. Link
--2014--
Thilker D., Vinsen K. - "Early science from the Pan-STARRS1 Optical Galaxy Survey (POGS): Maps of stellar mass and star formation rate surface density obtained from distributed-computing pixel-SED fitting". AAS Meeting #223, 2014. Link
--2013--
Vinsen K., Thilker D. - "A BOINC based, citizen-science project for pixel spectral energy distribution fitting of resolved galaxies in multi-wavelength surveys". Astronomy & Computing 3, 2013. Link
Vinsen K. - "A BOINC based project for Spectral Energy Distribution fitting". Galaxy Zoo Conference, 2013. Link
Taufer M., An C., Kerstens A., Brooks C. - "Predictor@Home: A "Protein Structure Prediction Supercomputer' Based on Global Computing". IEEE Transact on Parallel and Distribuited Systems 17(8), 2006. Link

Campos F. - "Parallel and distributed computing in the fields of number theory". 2012. Link
--2010--
Busch M.S., Sedano A., Simonson T. - "Computational protein design: validation and possible relevance as a tool for homology searching and fold recognition". PloS One 5(5), 2010. Link
--2009--
Busch M.S., Mignon D, Simonson T. - "Computational protein design as a tool for fold recognition". Proteins 77(1), 2009. Link
--2008--
Busch M.S., Lopes A., Mignon D, Simonson T. - "Computational protein design: Software implementation, parameter optimization, and performance of a simple model". J. Comput. Chem. 29(7), 2008. Link
Busch M.S., Lopes A., Amara N. et al. - "Testing the Coulomb/Accessible Surface Area solvent model for protein stability, ligand binding, and protein design". Bioinformatics 9, 2008. Link
Sjaugi M.F., Tan S. et al. - "g-FLUA2H: a web-based application to study the dynamics of animal-to-human mutation transmission for influenza viruses". BMC Medical Genomics 8(4), 2015. Link

--2017--
Dohm S. Spohr E., Korth M. - "Developing adaptive QM/MM computer simulations for electrochemistry". J of Comput Chemist 38(1), 2017. Link
--2015--
Husch T., Yilmazer MD., Balducci A., Korth M - "Large-scale virtual high-throughput screening for the identification of new battery electrolyte solvents: computing infrastructure and collective properties". Phys Chemisty Chemical Phys 17, 2015. Link
--2013--
Yilmazer MD., Korth M. - "Comparison of molecular mechanics, semi-empirical quantum mechanical, and density functional theory methods for scoring protein-ligand interactions". Journal Phys. Chem. B 117(27), 2013. Link
--2011--
Korth M., Grimme S., Towler M.D. - "The lithium-thiophene riddle revisited". J. of Phys Chem A 115(42), 2011. Link
--2010--
Korth M. - "More quantum chemistry with BOINC". 6th Boinc Workshop, 2010. Link
--2008--
Korth M., Lüchow A., Grimme S.J. - "Toward the Exact Solution of the Electronic Schrödinger Equation for Noncovalent Molecular Interactions: Worldwide Distributed Quantum Monte Carlo Calculations". Phys. Chem. A 112(10), 2008. Link
Rainey C., Engelhardt L., et al. - "QMC Goes BOINC: Using Public Resource Computing to Perform Quantum Monte Carlo Calculations". 75th Annual Meeting of APS, 2008. Link
Bande A., Lüchow A. - "Vanadium oxide compounds with quantum Monte Carlo". Phys. Chem. 10, 2008. Link
--2007--
Grimme S.J., Steinmetz M, Korth M. - "How to compute isomerization energies of organic molecules with quantum chemical methods". Journal Org.Chem. 72(6), 2007. Link
--2005--
Diedrich C., Lüchow A., Grimme S.J. - "Weak intermolecular interactions calculated with diffusion Monte Carlo". J. Chem. Phys. 123(18), 2005. Link
Leguy J., Glavatskikh M. et al. - "Scalable estimator of the diversity for de novo molecular generation resulting in a more robust QM dataset (OD9) and a more efficient molecular optimization". J of Cheminformatics 13(76), 2021. Link
Leguy J., De Mota B. et al. - "EvoMol: a flexible and interpretable evolutionary algorithm for unbiased de novo molecular generation". J of Cheminformatics 12(55), 2020. Link
Da Mota B., Leguy J. et al. - "Dataset’s chemical diversity limits the generalizability of machine learning predictions". J of Cheminformatics 11(69), 2019. Link

Kornbergher B. - "Distribuited Computing for Problems from Combinatorial Geometry". Phd Thesis, 2005. Link

Kaukonen J. - "Renderfarm.fi: Making movies with a screensaver". 7th Boinc Workshop, 2011. Link
Seppala H., Suomalainen N. - "Integrating open source distributed rendering solutions in public and closed networking environments". Laurea Thesis, 2010. Link
Martinez R., Enriquez P.A. et al. - "Dynamics of the O(3P) + CH4 ? OH + CH3 Reaction Is Similar To That of a Triatomic Reaction". J. Phys. Chem. A 116(21), 2012. Link

2019 - 2017 - 2016 - 2015 - 2014 - 2013 - 2012 - 2011
--2019--
Zaikin O. - "SAT-based cryptanalysis: from parallelcomputing to volunteer computing". Russian SC Days, 2019. Link
--2017--
Afanasyev A., Zaikin O. et al. - "Concept of a multitask grid system with a flexible allocation of idle computational resources of supercomputers". J of Comp and Syst Science Intern 56, 2017. Link
Zaikin O., Semenov A. et al. - "A Volunteer-Computing-Based Grid Architecture Incorporating Idle Resources of Computational Clusters". Lecture notes in Comp Science, 2017. Link
--2016--
Zaikin O., Semenov A. et al. - "Estimations of cryptographic resistance of ciphers in the Trivium family to SAT-based cryptanalysis". Prikl. Diskr. Mat. Suppl 9, 2016. Link
Zaikin O., Zhuravlev A. et al. - "On the Construction of Triples of Diagonal Latin Squares of Order 10". Discrete Math Days Barcelona, 2016. Link
Semenov A., Zaikin O. - "SAT-based search for systems of diagonal latin squares in volunteer computing project SAT@home". 39th Conf of Inter and Commun Tech, Electr and Microelectr (MIPRO), 2016. Link
Semenov A., Zaikin O. - "Algorithm for finding partitionings of hard variants of boolean satisfiability problem with application to inversion of some cryptographic functions". SpringerPlus 5(554), 2016. Link
--2015--
Zaikin O., Semenov A. - "Solving weakened cryptanalysis problems for the Bivium cipher in the volunteer computing project SAT@home". Inter J of Open Infor Tech 3(12), 2015. Link
Afanasyev A. - "What kinds of problems are suitable to be solved by desktop grid environment?". Proceeding of Boinc:Fast, 2015. Link
Zaikin O., Semenov A., Otpuschennikov I. - "Solving Weakened Cryptanalysis Problems for the Bivium Keystream Generator in the Volunteer Computing Project SAT@home". Proceeding of Boinc:Fast, 2015. Link
Zaikin O., Kochemazov S. - "The Search for Systems of Diagonal Latin Squares Using the SAT@home Project". Proceeding of Boinc:Fast, 2015. Link
Semenov A., Zaikin O. - "Using Monte Carlo Method for Searching Partitionings of Hard Variants of Boolean Satisfiability Problem". Proceeding of PaCT 2015 (Lecture Notes in Computer Science 9251). Link
--2014--
Manzyuk M., Zaikin O. - "Tool for utilizing idle resources of computing clusters in volunteer computing". 6th Int. Conf. "Distributed Computing and Grid-Technologies in Science and Educations", 2014. Link
Zaikin O., Semenov A. - "Solving weakened cryptanalysis problems of Bivium cipher in the volunteer project SAT@home". 6th Int. Conf. "Distributed Computing and Grid-Technologies in Science and Educations", 2014. Link
Semenov A., Zaikin O., Otpuschennikov I. - "Using Volunteer Computing for Mounting SAT-based Cryptographic Attacks". Submitted. Link
--2013--
Semenov A.,Zaikin O. - "On estimating total time to solve SAT in distributed computing environments: Application to the SAT@home project". 16th International Conference SAT, 2013. Link
--2012--
Posypkin M.,Semenov A.,Zaikin O. - "Using BOINC desktop grid to solve large scale SAT problems". Computer Science 13(1), 2012. Link
Zaikin O. - "SAT@Home Experience". Grid 2012. Link
--2011--
Posypkin M.,Semenov A.,Zaikin O. - "Parallel algorithms for SAT in application to inversion problems of some discrete functions", CoRR (2011). Link
Posypkin M.,Semenov A.,Zaikin O. - "Parallel Logical Cryptanalysis of the Generator A5/1 in BNB-Grid System". Lecture Notes in Computer Science 6873, 2011. Link
Richards W.G. - "Virtual screening using grid computing: the screensaver project". Nature Reviews Drug Discovery 1(7), 2002. Link
Richards W.G., Davies E.K. et al. - "Pattern recognition and massively distributed computing". J of Computational Chemistry 23(16), 2002. Link

--2014--
Arnold R., Goldenberg F., Mewes H.W., Rattei T. - "SIMAP The database of all-against-all protein sequence similarities and annotations with new interfaces and increased coverage". Nucleic Acids Res. 42, 2014. Link
--2011--
Navonil M. - "Distributed computing and modeling simulation: Speeding up simulations and creating large models". Proc of Winter Simul Confer, 2011. Link
--2010--
Rattei T., Tischler P., Götz S., Jehl M.A., Hoser J., et al. - "SIMAP A comprehensive database of pre-calculated protein sequence similarities, domains, annotations and clusters". Nucleic Acids Res. 38, 2010. Link
--2008--
Rattei T., Tischler P., Arnold R., Hamberger F., Krebs J., et al. - "SIMAP Structuring the network of protein similarities". Nucleic Acids Res. 36, 2008. Link
--2006--
Arnold R., Rattei T., Tischler P., Truong M.D., Stümpflen V., Mewes W. - "SIMAP The similarity matrix of proteins". Nucleic Acids Res. 34, 2006. Link

--2009--
Powell G., Engelhardt L., Schroder C., Hilbig T. - "How to use 100,000 PCs for studying magnetism". 76th Meeting of American Physical Society 54(16), 2009. Link
--2008--
Rainey C., Engelhardt L., Schroder C., Hilbig T. - "QMC Goes BOINC: Using Public Resource Computing to Perform Quantum Monte Carlo Calculations". 75th Meeting of American Physical Society 53(13), 2008. Link
Schröder C., Prozorov R., Kögerler P., Vannette M.D. et al. - "Multiple nearest-neighbor exchange model for the frustrated Keplerate magnetic molecules Mo72Fe30 and Mo72Cr30". Phys. Rev. B, 2008. Link
--2007--
Schröder C. - "The world is not enough! Spin dynamics simulations for magnetic nanostructures on a global scale". PhD Phys Presentation Univ of Osbabruck, 2007. Link

--2011--
Silberstein M. - "Building an online domain-specific computing service over non-dedicated grid and cloud resources: the Superlink-online experience". 11th Intern Sympos on Cluster, Cloud and Grid Compu, 2011. Link
Silberstein M. - "Building online computing service over volunteer grid resources". Parall and Distrib Workshp IPDPSW, 2011. Link
--2009--
Silberstein M., Sharov A. et al. -"GridBot: Execution of Bags of Tasks in Multiple Grids". IEEE Conf on Comp Analysis, 2009. Link
--2008--
Silberstein M., Sharov A., Schuster A. et al. - "Superlink-Online. A distribuited System for Genetic Linkage Analysis using EGEE and Boinc". EGEE Forum, 2008. Link
--2007--
Silberstein M., Geiger D., Schuster A. - "A Distributed System for Genetic Linkage Analysis". Lecture Notes in Computer Science 4360, 2007. Link

2019 - 2017 - 2016 - 2015 - 2014 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008 - 2006
--2019--
Temelkovski D. - "Conceptual Framework and Methodology for Analysing Previous Molecular Docking Results". Phd Thesis, 2019. Link
--2017--
Temelkovski D., Kiss T. et al. - "Molecular docking with Raccoon2 on clouds: extending desktop applications with cloud computing". IWSG 2017. Link
Temelkovski D. - "Conceptual Framework and Methodology for Analysing Previous Molecular Docking Results". Phd Thesis, 2019. https://westminsterresearch.westminster.ac.uk/download/e580d3f467913dcdf7063b2d4afac3fcd04ce7fb11b628e0dffaa9cdd79762d9/6171238/thesis2019-04-30_amended.pdf
Tihanyi N., Kovacs A., Kovacs J. - "Computing Extremely Large Values of the Riemann Zeta Function". J of Grid Comput 15(4), 2017.Link
--2016--
Marosi A., Kacsuk P. - "Volunteer Clouds: From Volunteer Computing to Interconnected Infrastructures". Develop Interop and Feder Cloud Archit Book, 2016. Link
--2015--
Kacsuk P., Farkas Z., Kovacs J. et al. - "Desktop grid in era of Cloud Computing". Grid Computing: Techniques and Future Prospects, 2015. Link
Marosi A., Lovas R. - "Defining volunteer computing: a formal approach". Computer Research and Modeling 7(3), 2015. Link
Marosi A., Kacsuk P. et al. - "Brokering Solution for Science Gateways using Multiple Distributed Computing Infrastructures". 7th Int Workshop on Science Gateways, 2015. Link
--2014--
Marosi A. - "SZTAKI Desktop Grid". IGDF Technical Meeting, 2014. Link
Taylor S.J.E, Ghorbani M. et al. - "Investigating the speedup of systems biology simulation using the Sztaki desktop grid". Winter Simul Confer, 2014. Link
--2013--
Gordienko Y., Bekenov L. et al. - "Complex Workflow Management and Integration of Distributed Computing Resources by Science Gateway Portal for Molecular Dynamics Simulations in Materials Science". 3th Intern Confer "HPC-UA", 2013. Link
Micsik A., Pallinger P. et al. - "Using the BonFIRE Testbed for Testing Scalability of the KOPI Service". ERCIM News 95, 2013. Link
Kiss A.K. - "Loopholes of Plagiarism Detection Software". Procedia-Social and Behavioral Science 106, 2013. Link
Pataki M,, Marosi A. - "Searching for translated plagiarism whit the help of desktop grids". J of Grid Comp 11(1), 2013. Link
Kovacs A., Tihanyi N. - "Efficient computing of n-dimensional simultaneous Diophantine approximation problems". Acta Univ. Sapientiae Informatica 5, 2013. Link
Tihanyi N. - "10305 peak values of the Riemann-Siegel Z function where Z(t) >500". Acta Univ. Sapientiae Informatica 5, 2013. Link
--2012--
Marosi A., Kacsuk P. -"Utilizing the Power of Desktop Grid Systems by Web 2.0 Communities". Infocommun Journ, 2012. Link
--2011--
Gordienko Y.G. - "Change of Scaling and Appearance of Scale-Free Size Distribution in Aggregation Kinetics by Additive Rules". Physica A: Statistical Mechanics and Applications, 2011. Link
Kovacs A., Kacsuk P. - "Using a private desktop grid system for accelerating drug discovery". Future Generation Computer System 27(6), 2011. Link
--2010--
Odor G., "Surface pattern formation and scaling described by conserved lattice gases". Physical Review E 81, 2010. Link
Marosi A., Odor G. - "Exploring University Classes in Nonequilibrium Systems on SZTAKI Desktop Grid". 3rd Almeregrid Workshop, 2010. Link
--2009--
Kacsuk P., Kovacs J. et al. - "SZTAKI Desktop Grid (SZDG): A Flexible and Scalable Desktop Grid System". J. of Grid Computing 7(4), 2009. Link
Odor G., Liedke B. et al. - "Mapping of 2+1 dimensional KPZ growth onto driven lattice fas model of dimers". Physical Review E 79, 2009. Link
--2008--
Burksi P, Kovacs A. - "Exhaustive search methods for CNS polynomials". Monatshfte fur Mathematik 155(3-4), 2008. Link
--2006--
Kovaks J. - "KOPI Protection instead of Copy Protection". 2nd International Conference on Automated Production of Cross Media Content (Axmedis), 2006. Link
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Redondo C., Ritu A. - "Greyfish: An Out-of-the-Box, Reusable, Portable Cloud Storage Service". PEARC 2019. Link
Ritu A., Gerald J. - "Scalable Software Infrastructure for Integrating Supercomputing with Volunteer Computing and Cloud Computing". SCEC 2018. Link
Wilson L.A., Anderson D.P. - "VAST: Integrating Volunteer Computing into ExistingCyberinfrastructure". 2017. Link

--2007--
Ando T., Yamato I. - "Brownian Dynamics Approach to Protein Folding". Fronteers of Comput. Science, 2007. Link
--2005--
Ando T., Yamato I. - "Free Energy Landscapes of Two Model Peptides: Beta-Helical and Beta-Hairpin Peptides Explored with Brownian Dynamics Simulation". Molecular Simulation 31(10), 2005. Link
--2004--
Ando T., Meguro T., Yamato I. - "A New Implicit Solvent Model for Brownian Dynamics Simulation: Solvent-Accessible Surface Area Dependent Effective Charge Model". Journal of Computational Chemestry Japan 3(4), 2004. Link
--2003--
Ando T., Meguro T., Yamato I. - "Multiple Time Step Brownian Dynamics for Long Time Simulation of Biomolecules". Molecular Simulation 29(8), 2003. Link
Meguro T., Ando T., Yamato I. - "Development of Multifunctional Object-Oriented Program Library for Molecular Simulation and Structure Analysis". Journal of Computational Chemestry Japan 2(1), 2003. Link
Terrain
Zhu L., Zeng Z. - "A BOINC based System for Global Topographic Structure Extraction Using SRTM Digital Elevation Models". Geocomput Conf, 2005. Link

--2010--
Manning R.E., Collicott S.H. - "Liquid plugs in rectangular channels under a transverse gravity field". 49th AIAA Conference, 2010. Link
--2008--
Braun J.P. - "Zero Gravity Two-Phase Stability Solutions of Droplets in a bent circular cylinder". Master Thesis, 2008. Link
--2006--
Manning R.E. - "Gas Bubble Stability in a Sphere Layer". Master Thesis, 2006. Link
Manning R.E., Collicott S.H. - "Bubble Penetration Through a Single Layer Sphere Bed". 44rd AIAA Conference, 2006. Link

Khrapov N., Rozen V.V. et al. - "Using virtualization to protect the proprietary material science applications in volunteer computing". Open Eng. 8(1), 2018. Link
Khrapov N., Rozen V.V. et al. - "Volunteer Computing for Computational Materials Design". Lobachevskii Journal of Math 38(5), 2017. Link
Khrapov N., Oganov A. et al. - "Using Virtualization Technology within Volunteer Computing for Computational Material design". Proc of BOINC:FAST, 2017. Link

Ramanauskas M., Starikovicius V. et al. - "Global optimization of grillage-type foundations using a distributed genetic algorithm". J of Global Optim, 2019. Link
Ciegis R., Starikovicius V. - "Application of distributed parallel computing for dynamic visual cryptography". J of Supercomputing 72(6), 2016. Link
Monroe D. - "New Lower Bounds for van der Waerden Numbers Using Distributed Computing". Arxiv 2019. Link

--2014--
Bittebière A.K., Garbey M. et al. - "Structural blueprint and ontogeny determine the adaptive value of the plastic response to competition in clonal plants: a modelling approach". Evolutional Ecology 28(3), 2014. Link
Bittebière A.K., Mony C. - "Plant trait responses to fine-scale competitive landscape: evidence of spatio-temporal disintegration". Annals of botany 115(1), 2014. Link
--2013--
Smaoui M., Garbey M. - "Improving volunteer computing scheduling for evolutionary algorithms". Future Generation Comp Syst 29(1), 2013. Link
--2012--
Oborny B., Mony C., Herben T. - "From virtual plants to real communities: a review of modeling clonal growth". Ecological Modelling 234, 2012. Link
--2011--
Garbey M., Smaoui M., et al. - "The Vitual Prairie Project". 2nd International Conference on Parallel, Distributed, Gris and Cloud Computing for Engineering, 2011. Link
Mony C., Garbey M., Smaoui M., Benot M.L. - "Large Scale Parameter Study of an Individual Based Model of Clonal Plant with Volunteer Computing". Ecological Modelling 222, 2011. Link
--2009--
Mony C., & Garbey M. - "Updates on the Virtual Prairie Project". The 5th Pan-Galactic BOINC Workshop, 2009. Link
Smaoui M. & Garbey M. - "Parallel Genetic Algorithm Implementation for BOINC". Parallel Computing: From Multicores and GPU's to Petascale 19, ICPC 2009. Link
--2008--
Smaoui M., Garbey M., & Mony C. - "Virtual Prairie: Going green with volunteer computing". IEEE Asia-Pacific Services Computing Conference, 2008. Link
Garbey M. - "Virtual Prairies with Boinc". The 4th Pan-Galactic BOINC Workshop, 2008. Link
Mony C., Garbey M., & Smaoui M. - "Using modelling to understand clonal strategies in optimal growing conditions". 51st Annual Symposium of the International Association for Vegetation Science, 2008. Link
Garbey M., Mony C. & Smaoui M. - "Fluid flow - agent based hybrid model for the simulation of virtual prairies". Lecture Notes in Computational Science and Engineering 74,(PCFD Conference 2008). Link

--2018--
Subhlok J., Nguyen H. et al. - "Resilient parallel computing on volunteer PC grids". Concurrency and Computation 30(18), 2018. Link
--2016--
Rahman M.T., Nguyen H., Subhlok J. et al. - "Checkpointing to minimize completion time for Inter-dependent Parallel Processes on Volunteer Grids". CCGrid Conference, 2016. Link
--2015--
Tarikul I., Nguyen H., Subhlok J. - "Efficient Message Logging to Support Process Replicas in a Volunteer Computing Environment". Phd Thesis and Proc. Heterogenous Computing Workshop (HWC), IPDPS 2015. Link
--2012--
Nguyen H., Rohit E., Subhlok J., Gabriel E., Wang Q., M.S. Cheung, Anderson D. - "An Execution Environment for Robust Parallel Computing on Volunteer PC Grids". ICPP 41, 2012. Link
--2011--
Pedamallu E., Nguyen H., Kanna N., Subhlok J., Gabriel E., Wang Q., Cheung M.S., Anderson D. - "A Robust Communication Framework for Parallel Execution on Volunteer PC Grids". 11th IEEE/ACM International Symposium on Cluster, Cloud, and Grid Computing (CCGrid 2011). Link
--2010--
Anand R., Gabriel E, Subhlok J. - "Communication Target Selection for Replicated MPI Processes". The 17th EuroPVM/MPI 2010 Conference, 2010. Link
Subhlok J. - "Virtual Cluster based Parallel Computing on Volunteer Nodes". 4th Work on Desktop Grids (PCGrid), 2010. Link
Nguyen H. - "VolpeX Status Report". 6th Boinc Workshop, 2010. Link
Leblanc T., Subhlok J., Gabriel E. - "A High-Level Interpreted MPI Library for Parallel Computing in Volunteer Environments". 4th Workshop on Desktop Grids and Volunteer Computing Systems, 2010. Link
--2009--
LeBlanc T. - "Design and Evaluation of a Communications Library for Volunteer Computing Environments". PhD Thesis, 2009. Link
Subhlok J. - "Volpex Communication for Volunteer Computing". 5th Boinc Workshop, 2009. Link
Kanna N., Subhlok J., Gabriel E., Rohit E., Anderson D. - "A Communication Framework for Fault-tolerant Parallel Execution". 22nd Annual Workshop on Languages and Compilers for Parallel Computing, 2009. Link
LeBlanc T., Anand R., Gabriel E., Subhlok J. - "VolpexMPI: an MPI Library for Execution of Parallel Applications on Volatile Nodes". 16th EuroPVM/MPI Conference, 2009. Link
--2008--
Subhlok J. - "Inter-Task Communication on Volatile Nodes". 4th Boinc Workshop, 2008. Link
Acedo L., Morano J.A., Villanueva-Oller J., Villanueva R.J. - "Using random networks to study the dynamics of respiratory syncytial virus (RSV) in the Spanish region of Valencia". Mathem Models of Addictive Behav, Med&Engin 54(7-8), 2011. Link

Neverov V.S., Khrapov N. - "XANSONS for COD: a new small BOINC project in crystallography". Proceeding of Boinc:Fast 2017. Link
Neverov V.S. - "XaNSoNS: GPU-accelerated simulator of diffraction patterns of nanoparticles". SoftwareX 6, 2017. Link
Multidisciplinari
(Multidisciplinary)
Science United ° WCG ° YoYo
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Anderson D.P. - "Globally Scheduling Volunteer Computing." Future Internet 13(229), 2021. Link
Anderson D.P. - "Coordinated volunteer computing". 2018 Link

Sars Cov2 + Africa Rainfal + Smash Childhood Cancer + HelpStopTb + OpenZika + Mapping Cancer Markers + Go Fight Against Malaria (completed) + Computing For Clean Water + Discovery Degnue Drugs (completed) + Drug Search for Leishmaniasis (completed) + FightAIDS (completed) + Genome Comparison (completed) + Help Conquer Cancer (completed) + Help Cure Muscolar Dystrophy (completed) + Help Defeat Cancer (completed) + Help Fight Childhood Cancer (completed) + Human Proteome Folding (completed) + Nutritious Rice for the World (completed) + Clean Energy Project + Microbiome Immunity (completed)
Bouyaakoubi F., Tamym L. et al. - "Accelerating Influenza Antiviral Discovery with BOINC Computing". CCIS 2817, 2025. Link
Powell L.M., Karafinski A. - "Awareness of volunteer computing on the grid: Content within it texts". Issues in Inform Syst 22(1), 2021. Link
Progetto "Africa Rainfall Project"
La Coz C., Qidi Y. et al. - "High-resolution weather simulation for sub-Saharan Africa on the World Community Grid". 23rd EGU General Assembly, 2022. Link
Treinish L., Le Coz C. et al. - "Meso-gamma-scale numerical weather simulations for sub-Saharan Africa via grid-based, distributed computing". Link
Giensen N.V.D, Le Coz C. et al. - "The African Rainfall Project: High resolution (1km) weather modeling at continental scale thanks to the World Community Grid". AGU Fall Meeting, 2020. Link
Progetto "Smash Childhood Cancer"
Fukuda M., Takatori A. et al. - "Effects of novel small compounds targeting TrkB on neuronal cell survival and depression-like behavior". Neochemis Intern 97, 2016. Link
Meletiou A., Shannon G. et al. - "Utilising IBM’s World Community Grid (WCG) virtual supercomputer to model mycolic acids from Mycobacterium tuberculosis". Big Data in Biomolec Syst Confer, 2016. Link
--2022--
Mottin M., De Paula Sousa B.K. et al. - "Discovery of New Zika Protease and Polymerase Inhibitors through the Open Science Collaboration Project OpenZika". J. Chem. Inf. Model. 62(24), 2022. Link
--2021--
Cataneo A.H., Avila E.P. et al. - "Flavonoids as Molecules With Anti-Zika virus Activity". Front. Microbiol. 12, 2021. Link
Lima C.S., Mottin M. et al. - "Flavonoids from Pterogyne nitens as Zika virus NS2B-NS3 protease inhibitors". Bioorganic Chemistry 109, 2021. Link
--2020--
Ekins S., Mottin M. et al. - "Déjà vu: Stimulating open drug discovery for SARS-CoV-2". Drug Discovery Today 25(5), 2020. Link
--2019--
Silva S., Shimizu J.F. et al. - "A diarylamine derived from anthranilic acid inhibits ZIKV replication". Nature Scientic Reports 9(17703), 2019. Link
Hernandez H.W., Soeung M., Mottin M. et al. - "High Throughput and Computational Repurposing for Neglected Diseases". Pharmaceutical Research 36(27), 2019. Link
--2018--
Mottin M., Andrade C.H. et al. - "Computational Drug Discovery for the Zika Virus". Brazilian Jour of Pharm Science 54(1), 2018. Link
Mottin M. - "Discovery of new antiviral candidates against zika virus". ACS National Meeting, 2018. Link
Mottin M., Andrade C.H. et al. - "The A–Z of Zika drug discovery". Drug Discovery Today, 2018. Link
--2017--
Mottin M. - "OpenZika: Opening the Discovery of New Antiviral candidates against Zika Virus and Insights into Dynamic behavior of NS3 Helicase". 46th World Chemist Congress, 2017. Link
Motin M., Braga R.C., Silva J.H. et al - "Molecular Dynamics simulations of Zika Virus NS3 helicase: Insights into RNA binding site activity". Biochem and Biophys Research Commun 492(4), 2017. Link
--2016--
Motim M., Perryman A.L. et al. - "OpenZika: an open science collaboration project to discover drug candidates against Zika virus". 8th Brazilian Symposium on Medicinal Chem, 2016. Link
Ekins S., Perryman A.L., Andrade C.H. - "OpenZika: An IBM World Community Grid Project to Accelerate Zika Virus Drug Discovery". PLOS Neglected Tropical Disease, 2016. Link
Ekins S., Andrade C.H. et al. - "Illustrating and homology modeling the proteins of the Zika virus". F1000 Research 5(275), 2016. Link
Progetto "Mapping Cancer Markers"
Hauschild A.C., Jurisica I. et al. - "Visualization of Biomedical Networks".Encyclopedia of Bioinf and Comput Biology 81, 2018. Link
Paulitti A, Jurisica I, et al. - "The ablation of the matricellular protein EMILIN2 causes defective vascularization due to impaired EGFR-dependent IL-8 production affecting tumor growth". Oncogene, Feb 27. 2018. Link
Wong S., Jurisica I. et al. - "SDREGION: Fast spotting of changing communities in biological networks". BMC Cancer 18(1):408, 2018. Link
Rahmati S., Jurisica I. et al - "Two Decades of Biological Pathway Databases: Results and Challenges". Encyclopedia of Bioinf and Comput Biology 81, 2018. Link
Haushid A-C., Jurisica I. et al. - "Network motif families for lung cancer diagnostics - A World Community Grid approach". GLBio 2017. Link
Fortney K, Griesman J, Jurisica I. et al. - "Prioritizing therapeutics for lung cancer: An integrative meta-analysis of cancer gene signatures and chemogenomic data". Plos One 11(3), 2015. Link
Kotlyar M., Pastrello C., Jurisica I. et al. - "In silico prediction of physical protein interactions and characterization of interactome orphans". Nature Methods 12 (79-84), 2015. Link
Wong S., Cercone N. and Jurisica I. - "Comparative network analysis via differential graphlet communities". Proteomics 15 (2-3), 2015. Link
Progetto "Go Fight against Malaria"
Perryman A.L., Yu W., Wang X. et al - "A Virtual Screen Discovers Novel, Fragment-Sized Inhibitors of Mycobacterium tuberculosis InhA". J Chem Inform Model, 2015. Link
Progetto "Computing for Clean Water"
--2018--
Cao W., Wang J. et al. - "Carbon nanostructure based mechano-nanofluidics". J of Micromod and Microeng 28(3), 2018. Link
--2015--
Ma M., Grey F., Shen L. et al. - "Water transport inside carbon nanotubes mediated by phonon-induced oscillating friction". Nature Nanotech 10, 2015. Link
--2011--
Xiong W. et al. - "Strain engineering water transport in graphene nanochannels". Physical Review E 84(5), 2011. Link
Ming D. Ma, Shen L., Sheridan J., Liu Z.J. et al. - "Friction of water slipping in carbon nanotubes". Physical Review E 83, 2011. Link
Progetto "Discovery Dengue Drugs"
Malmstrom R. D - "Discovering Dengue Drugs-Together: Grid Scale Virtual Screening with Mean Field Free Energy of Binding Rescoring". Phd dissertation, 2021. Link
Viswanathan U., Tomlinson S.M., Fonner J.M. et al. - "Identification of a Novel Inhibitor of Dengue Virus Protease through Use of a Virtual Screening Drug Discovery Web Portal". J. Chem. Inform. Model 54(10), 2014. Link
Tomlinson S.M., Malmstrom R.D., Watowich S.J. – "New approaches to structure-based discovery of dengue protease inhibitors". Infect Disor. Drug Target 9(3), 2009. Link
Progetto "Drug Search for Leishmaniasis"
Ochoa, R, et al. "Drug search for leishmaniasis: a virtual screening approach by grid computing." Journal of Computer-Aided Molecular Design30(7), 2016. Link
Mesa C.V. - "In Silico Screening of Potential Drug with Antileishmanial Activity and Validation of their Activity by in Vitro and in Vivo Studies". J of Chem and Chem Engineering 9(6), 2015. Link
Flórez A.F., Watowich S., Muskus C. - "Current Advances in Computational Strategies for Drug Discovery in Leishmaniasis". Current Topics in Tropical Medicine cap.16, 2012. Link
--2023--
Sun Q., Biswa A. et al. - "Structure-based virtual screening workflow to identify antivirals targeting HIV-1 capsid". J Comput Aided Mol Des 36, 2022.Link
--2020--
Craveur P., Gres A.T et al. - "Novel Intersubunit Interaction Critical for HIV-1 Core AssemblyDefines a Potentially Targetable Inhibitor Binding Pocket". Americ Society for Microb, 2020. Link
--2019--
Xia J., Flynn W., Gallicchio E. et al. - "Massive-Scale Binding Free Energy Simulations of HIV Integrase Complexes Using Asynchronous Replica Exchange Framework Implemented on the IBM WCG Distributed Network". J of Chemic Inform and Modelling 59(4), 2019. Link
--2015--
Gallicchio E., Xia J. et al. - "Asynchronous replica exchange software for grid and heterogeneous computing". Comp Phys Comunic 196, 2015. Link
Deng N. et al. - "Distinguishing Binders from False Positives by Free Energy Calculations: Fragment Screening Against the Flap Site of HIV Protease". The J of Physical Chemistry B 119(3), 2015. Link
Xia J., Flynn W., Gallicchio E. et al. - "Large-scale asynchronous and distributed multidimensional replica exchange molecular simulations and efficiency analysis". J of Comput Chemis 2015. Link
Forli S., Olson A.J.- "Computational Challenges of Structure-Based Approaches Applied to HIV". Current Topics in Microbiol. and Immunol. 389, 2015. Link
--2014--
Perryman A.L., Santiago D.N., Forli S., Santos-Martins D., Olson A.J. - "Virtual screening with AutoDock Vina and the common pharmacophore engine of a low diversity library of fragments and hits against the three allosteric sites of HIV integrase: participation in the SAMPL4 protein–ligand binding challenge". J. of Computer Aided Molecular Desing 28(4), 2014. Link
--2011--
Lin Y.C. et al. - "Structural basis for drug and substrate specificity exhibited by FIV encoding a chimeric FIV/HIV protease". Acta Crystallographica D 67(6), 2011. Link
--2010--
Perryman A.L., Forli S., Morris G.M., Burt C., Cheng Y., Palmer M.J. et al. – "A dynamic model of HIV integrase inhibition and drug resistance". J. of Molecular Biology 397(2), 2010. Link
Cosconati S., Forli S., Perryman A.L., Harris R. et al. - "Virtual Screening with AutoDock: Theory and Practice". Expert Opin. Drug Discovery 5(6), 2010. Link
Perryman A.L., Zhang Q., Soutter H.H., Rosenfeld R., McRee D.E. et al. – "Fragment-Based Screen against HIV Protease". Chem. Biol. Drug Des. 75(3), 2010. Link
--2009--
Morris G.M., Huey R., Lindstrom W., Sanner M.F., Belew R.K. – "AutoDock4 and AutoDockTools4: Automated docking with selective receptor flexibility". J. of Computer Chem. 30(16), 2009. Link
--2007--
Chang M.W., Lindstrom W., Olson A.J., Belew R.K – "Analysis of HIV Wild-Type and Mutant Structures via in Silico Docking against Diverse Ligand Libraries". J. of Chemical Information and Modeling 47(3), 2007. Link
--2012--
Lifschitz S., Viana C.J.M., Tristão C., Marcos Catanho M. et al. - "Design and Implementation of ProteinWorldDB". Lecture Notes in Computer Science 7409, 2012. Link
--2010--
Otto T.D., Catanho M., Tristao C., – "ProteinWorldDB: querying radical pairwise alignments among protein sets from complete genomes". Oxford Journal of Bioinformatics 25(5), 2010. Link
Progetto "Help Conquer Cancer"
--2012--
Kotseruba Y., Cumbaa C.A., Jurisica I. - "High-throughput protein crystallization on the World Community Grid and the GPU". J.Phys.Conf.Ser. 341, 2012. Link
--2010--
Cumbba C.A., Jurisica I. – "Protein crystallization analysis on the World Community Grid". J. Struct. Funct. Genomics 11(1), 2010. Link
--2008--
Snell E.H., Luft J.R., Potter S.A. et al. – "Establishing a training set through the visual analysis of crystallization trials. Part I: 150 000 images". Acta Crystal D Biol. 64(11), 2008. Link
Snell E.H., Luft J.R., Potter S.A. et al. – "Establishing a training set through the visual analysis of crystallization trials. Part II: crystal examples". Acta Crystal D Biol. 64(11), 2008. Link
Progetto "Help Cure Muscolar Dystrophy"
--2022--
Dequeker C., David L. et al. - "From complete cross-docking to partners identification and binding sites predictions". PLoS Comput Biol 18(1), 2022. Link
--2019--
Dequeker C., Carbone A. et al. - "Decrypting protein surfaces by combining evolution, geometry, and molecular docking". Proteins 87(11), 2019. Link
--2018--
Nadalin F., Carbone A. - "Protein–protein interaction specificity is captured by contact preferences and interface composition". Bioinformatics 34(3), 2018. Link
Lagarde N., Carbone A. et al. - "Hidden partners: Using cross-docking calculations to predict binding sites for proteins with multiple interactions". Proteins 86(7), 2018. Link
--2017--
Laine E., Carbone A. - "Protein social behavior makes a stronger signal for partner identification than surface geometry". Proteins 85(1), 2017.Link
--2016--
Vamparys L., Benoist L. et al. - "Great interactions: How binding incorrect partners can teach us about protein recognition and function". Proteins:Structure, Function and Bioinfor, 2016. Link
--2013--
Lopes A., Sacquin-Mora S., Dimitrova V., Laine E. et al. - "Protein-Protein Interactions in a Crowded Environment: An Analysis via Cross-Docking Simulations and Evolutionary Information". PLOS Computational Biology 9(12), 2013. Link
--2012--
Bard N., Bertis V, Bolze R, Despez F. - "A Volunteer Computing Platform Experience for Neuromuscular Disease Problems". Desktop Grid Computing Book, 2012. Link
--2009--
Bertis V., Bolze R., Desprez F., Reed K. – "From Dedicated Grid to Volunteer Grid: Large Scale Execution of a Bioinformatics Application". J. of Grid Computing 7(4), 2009. Link
Engelen S., Trojan L.A., Mora S.S., Lavery R., Carbone A. – "Joint Evolutionary Trees: A Large-Scale Method To Predict Protein Interfaces Based on Sequence Sampling". PLOS Comput. Biol. 5(1), 2009. Link
--2008--
Mora S.S., Carbone A., Lavery R. – "Identification of Protein Interaction Partners and Protein–Protein Interaction Sites". J of Molec Biology 382(5), 2008. Link
--2011--
Foran D.J., Yang L., Chen W., Hu J., Goodell L.A., Reiss M. et al. - "ImageMiner: a software system for comparative analysis of tissue microarrays using content-based image retrieval, high-performance computing, and grid technology". Journal of the American Medical Informatics Association 18(4), 2011. Link
--2010--
Widener P., Chen W., Wang F., Yang L. et al. - "Grid-Enabled, High-performance Microscopy Image Analysis". 2010. Link
--2009--
Yang L., Chen W., Meer P., Salaru G. et al. – "Virtual Microscopy and Grid-enabled Decision Support for Large Scale Analysis of Imaged Pathology Specimens". IEEE Trans Inf. Technol. Biomed. 13(4), 2009. Link
Yang L. - "Robust segmentation and object classification in natural and medical images". ETD Doctoral Thesis, 2009. Link
Yang L., Chen W., Meer P., Salaru G. et al. – "PathMiner: A Web-Based Tool for Computer-Assisted Diagnostics in Pathology". IEEE Trans Inf. Technol. Biomed. 13(3), 2009. Link
--2008--
Yang L. et al. - "High Throughput Analysis of Breast Cancer Specimens on the Grid". MICCAI 2008. Link
DiPaola R., Dvorzhinski D., Thalasila A. et al. – "Therapeutic starvation and autophagy in prostate cancer: A new paradigm for targeting metabolism in cancer therapy". Prostate 68(16), 2008. Link
Progetto "Help Fight Childhood Cancer"
--2016--
Fukuda M., Takatori A. et al. - "Effects of novel small compounds targeting TrkB on neuronal cell survival and depression-like behavior". Neurochem Internat 97, 2016. Link
--2014--
Yohko Nakamura Y., Suganami A., Fukuda M., Hasan K. et al. - "Identification of novel candidate compounds targeting TrkB to induce apoptosis in neuroblastoma". Cancer Medicine 3(1), 2014. Link
Progetto "Human Proteome Folding"
--2012--
Baltz A.G., Munschauer M., Schwanhäusser B., Vasile A., Murakawa Y. et al. - "The mRNA-Bound Proteome and Its Global Occupancy Profile on Protein-Coding Transcripts". Molecular Cell 46(5), 2012. Link
Pentony M.M., Winters P., Penfold-Brown D., Drew K, Narechania A. - "The Plant Proteome Folding Project: Structure and Positive Selection in Plant Protein Families". Genome Biology and Evolution 4(3), 2012. Link
--2011--
Drew K., Winters P., Butterfoss G.L. et al. - "The proteome folding project: Proteome-scale prediction of structure and function". Genome Research 21(11), 2011. Link
--2008--
Boxem M., Maliga Z., Klitgord N. et al – "A Protein Domain-Based Interactome Network for C. elegans Early Embryogenesis". Cell 134(3), 2008. Link
--2007--
Bonneau R., Facciotti M.T., Reiss D.J. et al – "A Predictive Model for Transcriptional Control of Physiology in a Free Living Cell". Cell 131(7), 2007. Link
Malmstrom L., Riffle M., Strauss C.E., Chivian D., Baker D. et al. – "Superfamily Assignments for the Yeast Proteome through Integration of Structure Prediction with the Gene Ontology", PLOS Comput. Biol 5(4), 2007. Link
Nissen E.A., Smith K.D., Bonneau R., Strong R.K., Aderem A. – "A conserved surface on Toll-like receptor 5 recognizes bacterial flagellin". J. of Experimental Medicine 204(2), 2007. Link
--2006--
Avila-Campillo I., Drew K., Lin J., Reiss D.J., Bonneau R. – "BioNetBuilder: automatic integration of biological networks". Bioinformatics 23(3), 2006. Link
Malmstrom L. – "Genome-wide structural and functional protein characterization by ab initio protein structure prediction". Lund University Press 4(5), 2006. Link
Progetto "Nutritious Rice for the World"
--2017--
Hung L.H., Samudrala R. - "Rice protein models from the Nutritious Rice for the World Project" (In Press). Link
--2014--
Hung L.H., Samudrala R. - "Fast protein cluster: parallel and optimized clustering of large-scale protein modeling data". Bioinformatics, 2014. Link
--2012--
Hung LH., Samudrala R. - "Accelerated protein structure comparison using TM-score-GPU". Bioinformatics 28(16), 2012. Link
--2011--
Hung L.H., Guerquin M., Samudrala R. - "GPU-Q-J, a fast method for calculating root mean square deviation (RMSD) after optimal superposition". BioMed Central Research Notes 4(97), 2011.Link
Progetto "Clean Energy Project"
--2017--
Lopez S.A., Sanchez-Lengeling B. et al. - "Design Principles and Top Non-Fullerene Acceptor Candidates for Organic Photovoltaics". Joule 1(4), 2017. Link
Lopez S.A. - "Identification of next-generation materials for organic solar cells via a collaborative theory-experimental approach". ICNM Seminars, 2017. Link
--2016--
Aspuru-Guzik A. - "Towards 3rd generation organic tandem solar cells with 20% efficiency: Accelerated discovery and rational design of carbon-based photovoltaic materials through massive distributed volunteer computing". DOE BES Research Project Final Report, 2016. Link
Pyzer-Knapp E. O., Simm G. N. et al. - "A Bayesian approach to calibrating high-throughput virtual screening results and application to organic photovoltaic materials". Materials Horizons 3(3), 2016. Link
--2015--
Pyzer-Knapp E.O., Suh C. et al. - "What Is High-Throughput Virtual Screening? A Perspective from Organic Materials Discovery". Annual Rev of Materials Research 45, 2015. Link
Pyzer-Knapp E., Li K., Aspuru-Guzik A. - "Learning from the Harvard Clean Energy Project: The Use of Neural Networks to Accelerate Materials Discovery". Advanced Functional Materials 25(36), 2015. Link
--2013--
Amador-Bedolla C. et al. - "Organic Photovoltaics". Informatics for Mater Science and Engin, 2013. Link
Hachmann J., Olivares-Amaya R., Jinich A., Appleton A.L., Blood-Forsythe M. et al. - "Lead candidates for high-performance organic photovoltaics from high-throughput quantum chemistry - Harvard Clean Energy Project". Energy & Environmental Science 7, 2013. Link
--2012--
Olivares-Amaya R. - "Quantum Chemistry in Nanoscale Environments: Insights on Surface-Enhanced Raman Scattering and Organic Photovoltaics". Doctoral dissertation, 2012. Link
--2011--
Hachmann J., Olivares-Amaya R. et al. - "Design principles and top non-fullerene acceptor candidates for organic photovoltaics using the Harvard clean energy project". J of Phys Chem 2(17), 2011. Link
Hachmann J., Olivares-Amaya R. et al. - "Accelerated computational discovery of high-performance materials for organic photovoltaics by means of cheminformatics". Energy & Environmental Science 12, 2011. Link
Hachmann J., Olivares-Amaya R. et al. - "The Harvard Clean Energy Project: Large-Scale Computational Screening and Design of Organic Photovoltaics on the World Community Grid". Physical Chemistry Letters 2(17), 2011. Link
Sokolov A.N., Atahan-Evrenk S., Mondal R., Akkerman HB et al. - "From computational discovery to experimental characterization of a high hole mobility organic crystal". Nature Communications 2, 2011. Link
Progetto "Microbiome Immunity"
Koehler Leman J., Szczerbiak P. et al. - "Sequence-structure-function relationships in the microbial protein universe". Nat Commun 14(2351), 2023. Link
Gligorijevic V., Kosciolek T. et al. - "Structure-Based Function Prediction using Graph Convolutional Networks". Nature Communications 12(1), 2021. Link

Evolution + ORG + Muon + Harmonious Trees
--2010--
Waxman D., Loewe L. - “A stochastic model for a single click of Muller’s ratchet”. Journal of theoretical Biology, 2010.Link
--2008--
Loewe L., Charlesworth B. - "Quantifying the threat from Muller's ratchet in the Amazon molly (Poecilia Formosa)". BMC Evolutionary Biology 8(88), 2008. Link
Loewe L., Cutter A. - "On the potential for extinction by Muller’s Ratchet in Caenorhabditis Elegans", BMC Evolutionary Biology 8(125), 2008. Link
Loewe L. - "Evolution@home: The first global computing system for evolutionary biology". Distributed & Grid Computing Book, 2008.
--2007--
Loewe L. - "Evolution@home: observations on participant choice, work unit variation and low-effort global computing". Software Practice & Experience 37, 2007. Link
--2006--
Loewe L. - "Quantifying the genomic decay paradox due to Muller's ratchet in human mitochondrial DNA". Genetics Research 87, 2006. Link
--2005--
Loewe L. - "Evolution@home: Global computing quantifies evolution due to Muller's ratchet", BMC Bioinformatics 6(3), 2005. Link
--2002--
Loewe L. - "Evolution@home: Experiences with Work Units That Span More than 7 Orders of Magnitude in Computational Complexity". 2nd IEEE/ACM Internat Sympos on Cluster Computing and Grid, 2002. Link
Loewe L. - "Global computing for bioinformatics". Briefings in Bioinformatics 3(4), 2002. Link
Gerbicz R. - "All solutions of the Diophantine equation a^6+b^6=c^6+d^6+e^6+f^6+g^6 for a,b,c,d,e,f,g < 250000 found with a distributed Boinc project". Arvix, 2011. Link
--2010--
Brooks S. -"Muon Capture Schemes for the Neutrino Factory". Degree Thesis, 2010. Link
--2006--
Brooks S. - "Secondary particle production and capture for muon accelerator applications". 10th Europ Particle Acceler Conf, 2006. Link
Brooks S. - "Muon1 Distributed Particle Accelerator Design". 2006. Link
Fang W. - "Searching on the boundary of abundance for odd weird numbers". Arxiv 2022. Link
Fang W., Beckert U. - "Parallel Tree Search in Volunteer Computing: a Case Study". J of Grid Computing 15, 2017. Link
Matematica
(Maths)
Gerasim ° Ithena ° NFS ° NumberFields ° PrimaBoinca ° PrimeGrid ° Rake Search ° Ramanujan Machine
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2025 -2024 - 2022 - 2021 - 2020 - 2019 - 2018 - 2017 - 2016 - 2015 - 2014
--2025--
Vatutin E., Wei-Ting J. et al. - "Construction of Intercalate Number Spectra in Latin Squares of Orders 18–28 Using Distributed Parallel Software Implementations of Heuristic Methods". RuscDays, 2025. Link
--2024--
Vatutin E., Belyshev A. et al. - "Diagonalization and Canonization of Latin Squares". Lecture Notes in Comp Science 14389, 2024. Link
Vatutin E., Zaikin O. - "Classification of Cells Mapping Schemes Related to Orthogonal Diagonal Latin Squares of Small Order". Lecture Notes in Comp Science 14389, 2024. Link
--2022--
Vatutin E., Zaikin O. et al. - "Searching for Orthogonal Latin Squares via Cells Mapping and BOINC-Based Cube-and-Conquer". CCIS 1510. Link
--2021--
Vatutin E., Nikitina N. et al. - "Evaluation of efficiency of using simple transformations when searching for orthogonal diagonal latin squares of order 10". Communic in Comput and Inform Science 1304, 2021. Link
--2020--
Vatutin E., Belyshev A. - "Enumerating the Orthogonal Diagonal Latin Squares of Small Order for Different Types of Orthogonality". RuSCDays 2020. Link
Vatutin E. - "Enumerating cyclic and pandiagonal latinsquare and their properties". NSCF 2020. Link
Vatutin E., Panishchev V et al. - "Comparison of decisions quality of heuristic methods based on modifyng operations in the graph shortest path problem". Problem of Inform Tech 1 (3-15), 2020. Link
Vatutin E., Nikitina N. et al. - "On polynomial reduction of problems based ondiagonal Latin squares to the exact cover problem". 2nd Int Workshop on Inf, Comput, and Control Systems for Distrib Envir, 2020. Link
Kochemazo S., Vatutin E. - "Enumerating Diagonal Latin Squaresof Order Up to 9". J of Integer Sequenses 23(20.1.2), 2020 Link
--2019--
Vatutin E. - "Using cell mapping schemes during searching for pairs of orthogonal diagonal latin squares". Russian SCDays, 2019. Link
Vatutin E., Zaikin O.S. et al. - "Central symmetry properties for diagonal latin squares". Problems of inform tech 2, 2019. Link
--2018--
Vatutin E.,Zaikin O.S. et al. - "Enumeration of isotopy classes of diagonal Latin squares of small order using volunteer computing". Russian SCDays, 2018. Link
Vatutin E. - "Orthogonality-based classification of diagonal Latin squares of order 10". 8th Intern Conf Grid 2018. Link
--2017--
Vatutin E. - "Comparison of Decisions Quality of Heuristic Methods with Limited Depth-First Search Techniques in the Graph Shortest Path Problem". Open Engineering 7(1), 2017. Link
Vatutin E., Zaikin O.S. et al. - "Using Volunteer Computing to Study Some Features of Diagonal Latin Squares". Open Engineering 7(1), 2017. Link
Vatutin E., Kochemazov S, Zaikin O.S. et al. - "About Symmetries in Diagonal Latin Squares". Tula 2017. Link
Vatutin E. - "Comparison of Decisions Quality of Heuristic Methods with Sequential Formation of the Decision in the Graph Shortest Path Problem". Proceeding of Boinc:Fast 2017. Link
Vatutin E., Kochemazov S, Zaikin O.S. et al. -"Enumerating the Transversals for Diagonal Latin Squares of Small Order". Proceeding of Boinc:Fast 2017. Link
--2016--
Vatutin E., Zaikin O.S. et al. - "Using grid systems for enumerating combinatorial objects on example of diagonal latin squares". Russian National Supercomp Forum, 2016. Link
Vatutin E., Titov S. - "On the selection of optimal structure organization of logic multicontrollers". Matec Web of Conf Jour 79, 2016. Link
Vatutin E., Valyaev S. et al. - "Using greedy methods on volunteer basis for comparison of decisions quality of heuristic methods in the problem of getting the shortest path in the graph with graph density constraint". 7th Intern Conf on Distrib Comput and Grid-Tech in Science and Educ, 2016. Link
Vatutin E., Valyaev S. et al. - "Quality analysis of block separations of graph-schemes of parallel control algorithms during logic control systems design using grid systems on volunteer basis". 7th Intern Conf on Distrib Comput and Grid-Tech in Science and Educ, 2016. Link
Vatutin E., Zaikin O.S., Zhuravlev A.D. et al. - "Using grid systems for enumerating combinatorial objects on example of diagonal Latin squares". 7th Intern Conf on Distrib Comput and Grid-Tech in Science and Educ, 2016. Link
--2015--
Vatutin E., Valyaev S.Y., Titov V.S. - "Comparison of sequential methods for getting separations of parallel logic control algorithms using volunteer computing". Proceeding of Boinc:Fast, 2015. Link
Vatutin E., Valyaev S.Y., Titov V.S. - "Testing of iterative heuristic methods at the problem of getting shortest path in ghaph with constraints". Proceeding of Boinc:Fast, 2015. Link
--2014--
Vatutin E. - "Voluntary distributed computing for solving discrete combinatorial optimization problems using Gerasim@home project". 6th Int Con. Distributed Computing and Grid-technologies in Science and Education, 2014. Link
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Leventhal J.W. - "Partial coverings and conditions for Sierpinski candidates". Parabola Vol. 60(1), 2024.Link
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Climatologia e Studio della Terra
(Climatology and Heart's study)
ClimatePrediction ° QCN ° Radioactive

2026 -2025 -2024 -2023 -2022 -2021 -2020 -2019 - 2018 - 2017 - 2016 - 2015 - 2014 - 2013 - 2012 - 2011 - 2010 - 2009 - 2008 - 2007 - 2006 - 2005 - 2004 - 2003
--2026--
Lizana J., Miranda N.D. et al. - "Global gridded dataset of heating and cooling degree days under climate change scenarios". Nat Sustain, 2026. Link
--2025--
Lawal K.A., Akintomide O.M. et al. - "Performance Evaluation of Weather@home2 Simulations over West African Region". Atmosphere 16(4), 2025. Link
Higgins T.B., Subramanian A.C. et al. - "Changes to Atmospheric River Related Extremes Over the United States West Coast Under Anthropogenic Warming". Geophys Research Lett 52(5), 2025. Link
Bouvier C., Cornér J. et al. - "Baroclinic Wave Simulation Ensemble: a Machine Learning ready dataset". Nature Sci Data 12(1811), 2025. Link
Rosier S., Shah S.et al. - "Statistical modelling of extreme daily rainfall over Aotearoa New Zealand". Weather and Climat Extremes 49(100799), 2025. Link
--2024--
Thomas A., McDonald A. et al. - "Anthropogenic Influence on Precipitation in Aotearoa New Zealand with Differing Circulation Types". Weather and Climat Extremes 46(100727), 2024.Link
Lizana J., Miranda N.D. et al. - "Ensemble of global climate simulations for temperature in historical, 1.5 °C and 2.0 °C scenarios from HadAM4". Sci Data 11(578), 2024.Link
Ye K., Woolings T. et al. - "Response of winter climate and extreme weather to projected Arctic sea-ice loss in very large-ensemble climate model simulations". npj Clim Atmos Sci 7(20), 2024. Link
Stojkovic, M., Mijic, A. et al. - "Novel Perspectives on Environmental Dynamic Resilience: Adapting Urban Water Systems to a Changing Climate". Water Resour Manage 38, 2024. Link
Harrintong R.J., Rosier S.M. et al. - "Robust changes to the wettest and driest days of the year are hidden within annual rainfall projections: a New Zealand case study". Environ Research Lett 19, 2024. Link
Aglas-Leitner, P., Perkins-Kirkpatrick, S. et al. - "Significant increase in heat-related human death toll due to climate change during 2009 Victoria heatwave". Deutsche Klimatagung 13 (56), 2024. Link
Fuckar N-S., Allen M. et al. - "Multi-method attribution of the 2023 boreal summer temperature extremes in the Mediterranean region". EGU General Assembly, 2024. Link
--2023--
Miranda N.D., Lizana J. et al. - "Change in cooling degree days with global mean temperature rise increasing from 1.5 °C to 2.0 °C". Nature Sustain 6 (1326-1330), 2023. Link
Ye K., Woolings T. et al. - "Robust Winter Climate and Extremes Response to Projected Arctic Sea-ice Loss in Unprecedented Large-ensemble Climate Simulations". AGU Fall Meeting 2023. Link
Stainforth A. - "A proposal for engaging amateur scientists in climate forecasting". EGU General Assembly 2023. Link
Thomas A., McDonald A. et al. - "Increasing temperature extremes in New Zealand and their connection to synoptic circulation features". Intern J of Climatology 43(3), 2023. Link
--2022--
Kimutai J., New M. et al. - "Attribution of the human influence on heavy rainfall associated with flooding events during the 2012, 2016, and 2018 March-April-May seasons in Kenya". Weather and Climate Extremes 38(100529), 2022. Link
Stone D.A., Rosier S.M. et al. - "The effect of experiment conditioning on estimates of human influence on extreme weather". Weather and Climate Extremes 36(100427), 2022. Link
Hawkins L.R., Abatzoglou J.T. et al. - "Anthropogenic Influence on Recent Severe Autumn Fire Weather in the West Coast of the United States". Geophys Research Lett 49(4), 2022. Link
Rimi H.R., Haustein K. et al. - "Risks of seasonal extreme rainfall events in Bangladesh under 1.5 and 2.0°C warmer worlds – how anthropogenic aerosols change the story". Hydrol. Earth Syst. Sci. 26 (5737–5756), 2022. Link
Anjali T., McDonald A. et al. - "Increasing temperature extremes in New Zealand and their connection to synoptic circulation features". Intern Journ of Climatology 2022. Link
Watson P., Sparrow S. et al. - "Understanding extreme events with multi-thousand member high-resolution global atmospheric simulations". EGU General Assembly, 2022. Link
Fallon C.J., Bloomfield H.C. et al. - "Understanding Climate Risk in Future Energy Systems: An Energy–Climate Data Hackathon". Bulleting of Americ Metereol Society 103(5), 2022. Link
Leach N.J., Watson P.A.G. et al. - "Generating samples of extreme winters to support climate adaptation". Weather and Climate Extremes 36(100419), 2022. Link
--2021--
Di Capua G, Sparrow S. et al. - "Drivers behind the summer 2010 wave train leading to Russian heatwave and Pakistan flooding". Nature NPJ Clim and Atmosph Science 4(55), 2021. Link
Li S., Sparrow S. et al. - "Anthropogenic climate change contribution to wildfire-prone weather conditions in the Cerrado and Arc of deforestation". Envirom Research Lett 16(9), 2021. Link
Aengenheyster M., Sparrow S. et al. - "Impact of sub-seasonal atmosphere-ocean interactions on extreme event statistics". 23rd EGU General Assembly, 2021. Link
Andrews T., Myhre G. et al. - "Effective radiative forcing in a GCM with fixed surface temperatures". JGR Atmosph, 2021. Link
Pham H.X., Shamseldin A.Y. et al. - "Projection of future extreme precipitation: a robust assessment of downscaled daily precipitation". Natural Hazards, 2021. Link
--2020--
Ruksana R., Karsten H. et al. - "A Multi-model Assessment of the Changing Risks of Extreme Rainfall Events in Bangladesh under 1.5 and 2.0 degrees' warmer worlds". 22nd EGU General Assembly, 2020. Link
Bevacqua E., Shepher T. et al. - "Larger spatial footprint of wintertime total precipitation extremes in a warmer climate". Earth and Space Science Open Archive ESSOAr, 2020. Link
Watson P., Sparrow S. et al. - "Multi-thousand member ensemble atmospheric simulations with global 60km resolution using climateprediction.net". 22nd EGU General Assembly, 2020. Link
Sparrow S. - "Using Citizen Science to Study Extreme Weather Around the Globe". Intern J of Simulation Systems, Science & Tech 21(2), 2020. Link
Sparrow S., Bowery A. et al. - "OpenIFS@home version 1: a citizen science project for ensemble weather and climate forecasting". Geoscientific Model Devel, 2020. Link
Naveau P., Hannart H. et al. - "Statistical Methods for Extreme Event Attribution in Climate Science". Annual Review of Statistics and Its Application 7(89-110), 2020. Link
Di Capua G., Kornhuber K. et al. - "Wave-resonance fingerprint in the 2010 summer: a modelling experiment". 22nd EGU General Assembly, 2020. Link
Montes D., Anel J.A. et al. - "Cloud Computing for Climate Modelling: Evaluation, Challenges and Benefits". Computers 9(2), 2020. Link
Undorf S., Allen K. et al. - "Learning from the 2018 heatwave in the context of climate change: are high-temperature extremes important for adaptation in Scotland?". Environm Research Letters 15(3), 2020. Link
Iyyanki M.K.V., Jayanthi P. - "The Impact of Climate Change on Human Eyes". Urban Health Risk and Resilience in Asian Cities Book, 2020. Link
Watson P., Sparrow S. et al. - "Multi-thousand member ensemble atmospheric simulations with global 60km resolution using climateprediction.net". EGU General Assembly art 10895, 2020. Link
Bussi G., Whitehead P.G. - "Impacts of droughts on low flows and water quality near power stations". Hydrolog Sciences Jour 65(6), 2020. Link
--2019--
Baker H.S., Woollings T. et al. - "Forced summer stationary waves: the opposing effects of direct radiative forcing and sea surface warming". Climate Dynamics 53, 2019. Link
Baker H.S., Woollings T. - "The Linear Sensitivity of the North Atlantic Oscillation and Eddy-Driven Jet to SSTs". J of Climate 32(19), 2019. Link
Marthews T.R., Jones R.G. et al. - "The Impact of Human-Induced Climate Change on Regional Drought in the Horn of Africa". JGR Atmosphere 124(8), 2019. Link
Sparrow S., Weisheimer A. et al. - "OpenIFS@home - Using citizen science to improve our understanding of weather forecasts". Geophys Research Abstracts 21, 2019. Link
Li S., Rupp D.E. et al. - "Reducing climate model biases by exploring parameter space with large ensembles of climate model simulations and statistical emulation". Geosci Model Dev 12 (3017-2048), 2019. Link
Hawkins L.R., Rupp D.E. et al. - "Parametric Sensitivity of Vegetation Dynamics in the TRIFFID Model and the Associated Uncertainty in Projected Climate Change Impacts on Western U.S. Forests". J of Advances in Modeling Earth Systems 11(8), 2019. Link
Lawal K.A., Stone D.A. - "On the Co-Variability between Climate Indices and the Potential Spread of Seasonal Climate Simulations over South African Provinces". Atmospheric and Climate Science 9(3), 2019. Link
Rimi R.H., Haustein K. et al. - "Evaluation of a large ensemble regional climate modelling system for extreme weather events analysis over Bangladesh". Intern Jour of Climat 39(6), 2019. Link
Gaupp F., Hall J. et al. - "Increasing risks of multiple breadbasket failure under 1.5 and 2°C global warming". Agricultural Systems 175, 2019. Link
Li S., Otto F.E.L. et al. - "A pan-South-America assessment of avoided exposure to dangerous extreme precipitation by limiting to 1.5 °C warming". Environ Resear Letter, 2019. Link
Marthews T.R., Jones R.G. et al. - "The Impact of Human-Induced Climate Change on Regional Drought in the Horn of Africa". JRG Atmosphere, 2019. Link
Wehner M. F., Zarzycki C. et al. - "Estimating the Human Influence on Tropical Cyclone Intensity as the Climate Changes". Hurrican Risk, 2019. Link
--2018--
Min S-K., Kim Y-H. et al. - "Quantifying human impact on the 2018 summer longest heat wave in South Korea". Bulletin of the American Meteorol Society, 2018. Link
Leach N., Li S. et al. - "Anthropogenic influence on the 2018 summer warm spell in Europe: the impact of different spatio-temporal scales". Bulletin of the American Meteorol Society, 2018. Link
Hirsch A.L., Benoit G. et al. - "Biogeophysical Impacts of Land-Use Change on Climate Extremes in Low-Emission Scenarios: Results From HAPPI-Land". Earth's Future 6(3), 2018. Link
Coxon G., Benoit G. et al. - "Projecting future changes in hydrological droughts in the UK : the impacts of bias correction and uncertainty in model predictions". 20th EGU Assembly, 2018. Link
Wallom D. - "Beyond Climate Change to Climate Services using Volunteer Computing". Boinc Workshop 2018. Link
Mitchell D., Heaviside C. et al. - "Extreme heat-related mortality avoided under Paris Agreement goals". Nature Climate Changevolume 8, 2018. Link
GuilloD B.P., Jones R.G. et al. - "A large set of potential past, present and future hydro-meteorological time series for the UK". Hydrol. Earth Syst. Sci 22, 2018. Link
Schaller N., Sparrow S.N. et al. - "Ensemble of European regional climate simulations for the winter of 2013 and 2014 from HadAM3P-RM3P". Nature Science Data 5, 2018. Link
Harrington L.J., Otto F.E.L. - "Changing population dynamics and uneven temperature emergence combine to exacerbate regional exposure to heat extremes under 1.5°C and 2°C of warming". Envir Research Lett 13(3), 2018. Link
--2017--
Benoit G., Alison K. et al. - "Managing the Risks, Impacts and Uncertainties of drought and water Scarcity (MaRIUS) project: Large set of potential past and future climate time series for the UK from the weather@home2 model". Centre for Ecol&Hydrol, 2017. Link
Guillod B.P., Bowery A. et al. - "Weather@home 2: validation of an improved global–regional climate modelling system". Geosci Model Dev 10(5), 2017. Link
Bowery A. - "The Climateprediction.net Infrastructure". Boinc Workshop 2017. Link
--2016--
Montes D., Anel J.A., Wallom D. et al. - "Enabling BOINC in Cloud Services: CPDN as Example". Europ Geosci Assembly 2016. Link
Sippel S., Otto F.E.L. et al. -"A novel bias correction methodology for climate impact simulations". Earth Syst. Dynam. 7, 2016. Link
Black M.T., Karoly D.J et al. - "The weather@home regional climate modelling project for Australia and New Zealand". J of Geoscientific Model Develop 9(9), 2016. Link
Guillod B.P., Bowery A. et al. - "Weather@home 2: validation of an improved global-regional climate modelling system". J of Geoscientific Model Develop, 2016. Link
Haustein K., Otto F.E.L. et al. - "Real-time extreme weather event attribution with forecast seasonal SSTs". Envir Research Lett 11(6), 2016. Link
Mitchell D., Davini P., Massey N. et al. - "Assessing mid-latitude dynamics in extreme event attribution systems". Climate Dinamics, 2016. Link
Otto F.E.L. - "Extreme events: The art of attribution". Nature Climate Change 6, 2016. Link
Parker H.R., Boyd E. et al. - "Stakeholder perceptions of event attribution in the loss and damage debate". Climate Policy 16, 2016. Link
Haustein K., Otto F.E.L. et al. - "Real-time extreme weather event attribution with forecast seasonal SSTs". Envirom Research Lett 11(6), 2016. Link
Guillod B.P., Massey N., Otto F.E.L. et al. - "Synthetic drought event sets: thousands of meteorological drought events for risk-based management under present and future conditions". Geophys Research Abstr 18, 2016. Link
Schaller N., Kay A.L., Massey N.R. et al. - "Human influence on climate in the 2014 southern England winter floods and their impacts". Nature Climate Change 2927, 2016. Link
--2015--
Otto F.E.L., Coelho C.A.S., King A. et al. - "Factors other than climate change, main drivers of 2014/15 water shortage in southeast Brazil". Bulletin of the American Met Soc 96(12), 2015. Link
Hannart A., Otto F.E.L., Vera C. - "Causal influence of anthropogenic forcings on the Argentinian heat wave of December 2013". Bulletin of the American Met Soc 96(12), 2015. Link
Rosier Z., Dean S. et al. - "Extreme rainfall in early July 2014 in Northland, New Zealand — Was there an anthropogenic influence?". Bulletin of the American Met Soc 96(12), 2015. Link
Hannart A. - "Causal counterfactual theory for the attribution of weather and climate-related events". American Meterological Society, 2015. Link
Lawal K.A., Stone D.A., Aina T. et al. - "Trends in the potential spread of seasonal climate simulations over South Africa". International Jour of Climatology 35(9), 2015. Link
Li S., Mote P.W., Rupp D.E. et al. - "Evaluation of a regional climate modeling effort for the western United States using a superensemble from weather@home".American Meterological Society 28, 2015. Link
Mera R., Massey N, Rupp D.E. et al. - "Climate change, climate justice and the application of probabilistic event attribution to summer heat extremes in the California Central Valley". Climatic Change Journal, 2015. Link
Mote P.W., Allen M.R., Jones R.G. et al. - "Superensemble regional climate modeling for the western US". American Meterological Society, 2015. Link
Otto F.L.E., Boyd E., Jones R.G. et al. - "Attribution of extreme weather events in Africa: a preliminary exploration of the science and policy implications". Climatic Change Journal 132(4), 2015. Link
Thompson A., Otto F.L.E. - "Ethical and normative implications of weather event attribution for policy discussions concerning loss and damage". Climatic Change Journal, 2015. Link
Otto F.L.E. - "Climate change: Attribution of extreme weather". Nature Geoscience 8, 2015. Link
Otto F.L.E., Frame D.J. et al. - "Embracing uncertainty in climate change policy". Nature Climate Change 5, 2015. Link
Rupp D.E., Li S., Massey N. et al. - "Anthropogenic influence on the changing likelihood of an exceptionally warm summer in Texas, 2011". Geophysical Research Letters 42(7), 2015. Link
Sippel S., Walton P, Otto F.L.E. - "Stakeholder Perspectives on the Attribution of Extreme Weather Events: An Explorative Enquiry". American Meterological Society 7(3), 2015. Link
Sippel S., Mitchell D. et al. - "Combining large model ensembles with extreme value statistics to improve attribution statements of rare events". Weather and Climate Extremes 9, 2015. Link
--2014--
Sippel S. Otto F.E.L. - "Beyond climatological extremes - assessing how the odds of hydrometeorological extreme events in South-East Europe change in a warming climate". Climatic Change 125, 2014. Link
Otto F.E.L., Rosier S.M. et al. - "Attribution analysis of high precipitation events in summer in England and Wales over the last decade". Climatic Change 125, 2014. Link
Huntingford C., Marsh T. et al. - "Potential influences on the United Kingdom's floods of winter 2013/14". Nature Climate Change 4, 2014. Link
Wallom D. - "Volunteer Crowd Computing and Federated Cloud developments". Crowd Computing Conference, 2014. Link
Wesselink A., Challinor A.J., Otto F.E.L. et al. - "Equipped to deal with uncertainty in climate and impacts predictions: lessons from internal peer review". Climatic Change, 2014. Link
Massey N., Jones R., Otto F.E.L. et al. - "Weather@home—development and validation of a very large ensemble modelling system for probabilistic event attribution". Quarterly Journal of the Royal Meteorological Society 2455, 2014. Link
Bowery A. - "Current Progress of CPDN". 10th Boinc Workshop, 2014. Link
--2013--
Otto F.E.L., Jones R.G., Halladay K., Allen M.R. - "Attribution of changes in precipitation patterns in African rainforests". Phil. Trans. Ro. Soc. B 368, 2013. Link
Sparrow S., Huntingford C., Massey N., Allen M. - "The use of very large atmospheric model ensemble to assess potential anthropogenic influence on the UK summer 2012 high rainfall totals. [in Explaining extreme events of 2012 from a climate perspective]". Bulletin of the American Meteorology Society 94, 2013. Link
Rupp D.E., Mote P.W., Massey N, Otto F.E.L., Allen M. - "Human Influence on the probability of low precipitation in the central United States in 2012 [in Explaining extreme events of 2012 from a climate perspective]". Bulletin of the American Meteorology Society 94 (S2-S6), 2013. Link
--2012--
Rupp D.E., Mote P.W., Massey N., Rye C.J., Jones R., Allen M.R. - "Did human influence on climate make the 2011 Texas drought more probable? [in Explaining extreme events of 2011 from a climate perspective]". Bulletin of the American Meteorology Society 93, 2012. Link
Massey N., Aina T., Rye C., Otto F.E.L., Wilson S., Jones R.G., Allen M.R. - "The attribution of warm November and cold December Central England temperatures. [in: Explaining extreme events of 2011 from a climate perspective]". Bulletin of the American Meteorological Society 93, 2012. Link
Otto F.E.L., Massey N., Van Oldenborgh G.J., Jones R.G., Allen M.R. - "Reconciling two approaches to attribution of the 2010 Russian heat wave". Geophysical Research Letters 39, 2012. Link
Ricke K., Rowlands D., Ingram W., Keith D., Morgan G.M. - "Effectiveness of stratospheric solar-radiation management as a function of climate sensitivity". Nature Climate Change 2, 2012. Link
Rowlands D.J., Frame D.J., Ackerley D., Aina T., Booth B.B.B., Christensen C., Collins M. et al. - "Broad range of 2050 warming from an observationally constrained large climate model ensemble". Nature Geoscience, 2012. Link
--2011--
Kay A.L., Crooks S.M., Pall P., Stone D.A. - "Attribution of Autumn/Winter 2000 flood risk in England to anthropogenic climate change: a catchment-based study". Journal of Hydrology 406, 2011. Link
Pall P., Aina T., Stone D., Stott P., Nozawa T., Hilberts A., D. Lohmann, Allen M.R. - "Anthropogenic greenhouse gas contribution to flood risk in England and Wales in Autumn 2000". Nature 470, 2011. Link
--2010--
Fowler H., Cooley D., Sain S., Thurston M. - "Detecting change in UK extreme precipitation using results from the climateprediction.net BBC climate change experiment". Extremes 13(2), 2010. Link
Sanderson B., Shell K., Ingram W. - "Climate feedbacks determined using radiative kernels in a multi-thousand member ensemble of AOGCMs". Climate Dynamics 35, 2010. Link
Ricke K., Morgan M.G., Allen M.R. - "Regional climate response to solar-radiation management". Nature Geoscience 3, 2010. Link
--2009--
Ackerley D., Highwood E.J., Frame D.J. - "Quantifying the effects of perturbing the physics of an interactive sulfur scheme using an ensemble of GCMs on the climateprediction.net platform". Journal of Geophysical Research Atmospheres 114, 2009. Link
Frame D.J., Aina T., Christensen C., Faull N.E. et al. - "The Climateprediction.Net BBC Climate Change Experiment: Design of the Coupled Model Ensemble". Philosof Transact of Royal Society 367, 2009. Link
Allen M.R., Frame D., Manson C. - "The case for mandatory sequestration". Nature Geoscience 2, 2009. Link
Stone D.A., Allen M.R., Stott P.A., Pall P., Min S., Nozawa T., Yukimoto S. - "The detection and attribution of human influence on climate". Annual Review of Environment and Resources 34, 2009. Link
Lopez A., Fung F., New M., Watts G., Weston A., Wilby R. - "From climate model ensembles to climate change impacts: a case study of water resource management in the South West of England". Water Resources Research 45, 2009. Link
--2008--
Knutti R., Krähenmann S., Frame J.D., Allen M.R. - "Comment on heat capacity, time constant and sensitivity of Earth’s climate system". Journal of Geophysical Research 113, 2008. Link
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Collins M. - "Ensembles and probabilities: a new era in the prediction of climate change". Philosophical Transactions of the Royal Society A 365, 2007. Link
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Hegerl G.C., Crowley T.J., Hyde W.T., Frame D.J. - "Climate sensitivity constrained by temperature reconstructions over the past seven centuries". Nature 440, 2006. Link
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Allen M.R., Lord R. - "The Blame Game – Who will pay for the damaging consequences of climate change?". Nature, 432, 2004. Link
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2023 - 2020 - 2019 - 2018 - 2017 - 2015 - 2014 - 2013 - 2011 - 2009 - 2008 - 2007
--2023--
Lynam C.J., Karunaratne A. - "Citizen Science and The University of Queensland Seismograph Stations (UQSS)—A Study of Seismic T Waves in S-W Pacific Ocean". Sustainability 15(14), 2023. Link
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H.K. Chen, W-T. Liang et al. - "Citizen Seismology in Taiwan: Development, Outreach, and Formative Assessment of Near-Real Time Earthquake Game Competition Activities". Frontiers in Earth Science 8(154), 2020. Link
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Prasad R.C., Mahajan R. et al. - "Earthquake Early Warning System (EEWS)". Intern Research J of Engineer and Tech 6(9), 2019. Link
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--2018--
Cochran E.S. - "To catch a quake". Nature Communications 9, 2018. Link
--2017--
Liang W.T., Lee J.C. et al. - "Citizen Earthquake Science in Taiwan:From Science to Hazard Mitigation". J of Disaster Research 12(6), 2017. Link
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Dixit A.M., Ringler A.T. et al. - "Strong-motion observations of the M 7.8 Gorkha, Nepal, earthquake sequence and development of the N-shake strong-motion network". Seismological Research 86(6), 2015. Link
Chung A.I., Cochran E.S. et al. - "Improved Rapid Magnitude Estimation for a Community-Based, Low-Cost MEMS Accelerometer Network". Seismolog Society of America 105(3), 2015. Link
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Lawrence J.F., Cochran E.S., Chung A. et al. - "Rapid Earthquake Characterization Using MEMS Accelerometers and Volunteer Hosts Following the M 7.2 Darfield, New Zealand, Earthquake". Seismological Society of America, 2014. Link
--2013--
Benson K., Schlacter S., Estrada T., Taufer M. et al. - "On the powerful use of simulations in the Quake-Catcher Network to efficiently position low-cost earthquake sensors". J. of Future Generation Computer Systems 29(8), 2013. Link
--2011--
Cochran E.S., Lawrence J.F., Kaiser A., Fry B., Chung A., Christensen C. - "Comparison between low-cost and traditional MEMS accelerometers: a case study from the M7.1 Darfield". Annals of Geophysics 54 (6), 2011. Link
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--2009--
Cochran E.S., Lawrence J.F., Christensen C., Chung A. - "A novel strong-motion seismic network for community participation in earthquake monitoring". IEEE Inst & Meas. 12(6), 2009. Link
Cochran E.S., Lawrence J.F, Christensen C., Jakka R. - "The Quake-Catcher Network: Citizen science expanding seismic horizons". Seismological Research Letters 80(1), 2009. Link
--2008--
Christensen C., Cochran E.S., Lawrence J.F - "The Quake-Catcher Network: A Volunteer Distributed Computing Seismic Network". 4th Boinc Workshop, 2008. Link
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--2007--
Lawrence J.F, Cochran E.S. - "The Quake Catcher Network: Cyberinfrastructure Bringing Seismology into Schools and Homes". American Geophysical Union Meeting, 2007. Link
Francesco Riggi - "Participating to a Network for World-Wide Monitoring Measurements". Educat and Amateur Geiger Counter Experiments. UNITEXT for Physics, 2024. Link